DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and Zfp445

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001346863.1 Gene:Zfp445 / 235682 MGIID:2143340 Length:998 Species:Mus musculus


Alignment Length:408 Identity:92/408 - (22%)
Similarity:145/408 - (35%) Gaps:120/408 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFR---- 66
            ||.|||         .|:.|: ..:.|.|:.||.....||.        |:...|:..|:|    
Mouse   484 CRVCGK---------AFKWRS-NRIRHEKIHTGVKPYQCSL--------CEKAFQRLSSYRLHQK 530

  Fly    67 ------------ERCLEVQRELLHSQDDEDFLR--ICQESPKSVLEQEELELDLAEISIEVERLD 117
                        :..|....::.|...|.|..:  .|.:..|:        ......:||.:|: 
Mouse   531 THSKQKRGSSKYKNALTCSLDVSHHLTDRDERKHLHCNQCGKN--------FSCKSYAIEHQRI- 586

  Fly   118 DLNEGPIQ----------SSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQE 172
            ...|.|.:          .|.|.....|:..::.:.|...||    .:..|    ..::|.:..|
Mouse   587 HTQEKPYKCTRCRKTFRWKSNFSRHMKLHHKEVYKQEKRQED----FKQSY----RQSQVISTVE 643

  Fly   173 LKSDSENPKKRRNRRNP-------RDSNRTFFCEECGNHIKDRISFILHCKR-HRGVK---EFG- 225
            .....:|..|...::..       ....:.:.|..||.....|.|:|:|.|| ...:|   |.| 
Mouse   644 KTFPCQNCGKTFTQKKSLIEHQRIHTGEKPYQCSGCGETFTYRSSYIIHMKRTQHAIKIKPEHGC 708

  Fly   226 -----------------------CEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTR 267
                                   |::|...|...:.|..|.|.||.|||::||.|.::|...|..
Mouse   709 LTFSQGAVFPIPRGSHNTEGSNKCKYCGKAFHNRSFLLIHERVHTREKPYQCRECEKAFRWSSNL 773

  Fly   268 LKHERTH----------------------TNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRC 310
            .:|:|.|                      .:::||.|:||...||....|.:|..:|:||:.|:|
Mouse   774 YRHQRKHFLHKRYKYRESKETSNLQSKILIDQKPFWCQECGKTFTRKRSLLDHKGIHSGERRFKC 838

  Fly   311 DLCDKLFSRYTHLTTHYR 328
            :||:|.|.|...|..|.|
Mouse   839 NLCEKSFDRNYRLVNHQR 856

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 18/86 (21%)
C2H2 Zn finger 198..218 CDD:275368 9/20 (45%)
COG5048 222..>276 CDD:227381 22/102 (22%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 11/23 (48%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 9/43 (21%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
Zfp445NP_001346863.1 SCAN 48..160 CDD:128708
KRAB 231..289 CDD:214630
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 445..472
COG5048 <461..611 CDD:227381 30/153 (20%)
C2H2 Zn finger 484..504 CDD:275368 9/29 (31%)
C2H2 Zn finger 512..532 CDD:275368 6/27 (22%)
COG5048 566..995 CDD:227381 71/308 (23%)
C2H2 Zn finger 567..587 CDD:275368 5/28 (18%)
C2H2 Zn finger 595..615 CDD:275368 2/19 (11%)
C2H2 Zn finger 648..668 CDD:275368 2/19 (11%)
C2H2 Zn finger 676..694 CDD:275368 7/17 (41%)
C2H2 Zn finger 732..752 CDD:275368 6/19 (32%)
C2H2 Zn finger 760..780 CDD:275368 7/19 (37%)
C2H2 Zn finger 810..830 CDD:275368 7/19 (37%)
C2H2 Zn finger 838..858 CDD:275368 9/19 (47%)
C2H2 Zn finger 947..967 CDD:275368
C2H2 Zn finger 975..995 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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