DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and ZNF281

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001268222.1 Gene:ZNF281 / 23528 HGNCID:13075 Length:895 Species:Homo sapiens


Alignment Length:196 Identity:57/196 - (29%)
Similarity:90/196 - (45%) Gaps:25/196 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly   134 ILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFC 198
            :|:.|...:|....|:.           :.||.|...:..|.:|:..|.   :|.|..|::.   
Human   196 LLSSSSRTDDHHGTEEP-----------KQDTNVKKAKRPKPESQGIKA---KRKPSASSKP--- 243

  Fly   199 EECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSD 263
                :.:.|....||...:    |...|:.|...|.:...|:||:..||||:||:|..||..|..
Human   244 ----SLVGDGEGAILSPSQ----KPHICDHCSAAFRSSYHLRRHVLIHTGERPFQCSQCSMGFIQ 300

  Fly   264 YSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYR 328
            .....:||:.|:.|:||.|.:|:..|...|.::.|...|:|||.::||.|.:.|||...|..|.|
Human   301 KYLLQRHEKIHSREKPFGCDQCSMKFIQKYHMERHKRTHSGEKPYKCDTCQQYFSRTDRLLKHRR 365

  Fly   329 S 329
            :
Human   366 T 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 3/19 (16%)
COG5048 222..>276 CDD:227381 20/53 (38%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 9/21 (43%)
C2H2 Zn finger 282..302 CDD:275368 5/19 (26%)
zf-H2C2_2 295..319 CDD:290200 9/23 (39%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
ZNF281NP_001268222.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..44
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 63..113
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 130..149
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..253 14/77 (18%)
C2H2 Zn finger 263..283 CDD:275368 6/19 (32%)
zf-H2C2_2 275..300 CDD:316026 13/24 (54%)
C2H2 Zn finger 291..311 CDD:275368 6/19 (32%)
zf-H2C2_2 304..328 CDD:316026 9/23 (39%)
C2H2 Zn finger 319..339 CDD:275368 5/19 (26%)
zf-H2C2_2 331..356 CDD:316026 9/24 (38%)
C2H2 Zn finger 347..366 CDD:275368 8/18 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 377..427
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 638..660
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 778..817
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.