DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and Zfp810

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_011240774.1 Gene:Zfp810 / 235050 MGIID:2384563 Length:466 Species:Mus musculus


Alignment Length:330 Identity:82/330 - (24%)
Similarity:135/330 - (40%) Gaps:79/330 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    61 QAISFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQ 125
            |...:|:..||....|:.       |..|...|:.:...|:                  ..||..
Mouse    25 QRTLYRDVMLETYSSLVS-------LGHCMAKPELIFNLEQ------------------GLGPRS 64

  Fly   126 SSGFKVEDILNESKIN---------------EDEPN----NEDDIDYSEMDYLI----------- 160
            ::|..|.::...:|::               :.|.|    ||:.::..::|..:           
Mouse    65 TAGASVWNLSGVNKVSSLVDTIQENDSRHFWQIEINSHTANEELVEVGKIDAELKIHEEIHRGAK 129

  Fly   161 -YESDTEVDA---------KQELKSDSENP---KKRRNRRNPRDS----------NRTFFCEECG 202
             ||.:..::|         ||...: .|||   ||.|....|:.:          .:...|.|||
Mouse   130 SYECEVCLEAFYLKPQYSTKQSYHT-CENPCDCKKCREAFYPKSTLSQYQRLERGEKPHACLECG 193

  Fly   203 NHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTR 267
            .....:....:|.:.|.|.|.:.|:.|...|.:.::|..|:|.||||||::|:.|.::|...|..
Mouse   194 KSFYCKSHLTVHQRTHTGEKPYDCKECRKAFYSKSQLNVHLRIHTGEKPYECKDCRKAFYRNSDL 258

  Fly   268 LKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAH 332
            ..|:||||.|:|:.||.|..||..:..|..|...|||||.:.|.:|:|.|...:.|..|:|::..
Mouse   259 TVHQRTHTGEKPYECKVCRKAFYCNSQLTVHHRTHTGEKPYECQVCNKAFYCKSQLAVHHRTHTG 323

  Fly   333 RRNMQ 337
            .:..|
Mouse   324 EKPYQ 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 4/15 (27%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 21/53 (40%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 11/23 (48%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 12/21 (57%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 6/17 (35%)
Zfp810XP_011240774.1 KRAB 4..59 CDD:214630 9/58 (16%)
C2H2 Zn finger 133..153 CDD:275368 3/19 (16%)
C2H2 Zn finger 161..181 CDD:275368 4/19 (21%)
C2H2 Zn finger 189..209 CDD:275368 5/19 (26%)
COG5048 <199..373 CDD:227381 47/130 (36%)
C2H2 Zn finger 217..237 CDD:275368 6/19 (32%)
C2H2 Zn finger 245..265 CDD:275368 6/19 (32%)
C2H2 Zn finger 273..293 CDD:275368 7/19 (37%)
C2H2 Zn finger 301..321 CDD:275368 7/19 (37%)
C2H2 Zn finger 329..349 CDD:275368 82/330 (25%)
C2H2 Zn finger 357..377 CDD:275368
zf-H2C2_2 369..392 CDD:372612
C2H2 Zn finger 385..405 CDD:275368
zf-H2C2_2 398..420 CDD:372612
C2H2 Zn finger 413..433 CDD:275368
C2H2 Zn finger 441..461 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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