DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and Zfp37

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001277279.1 Gene:Zfp37 / 22696 MGIID:99181 Length:594 Species:Mus musculus


Alignment Length:366 Identity:92/366 - (25%)
Similarity:147/366 - (40%) Gaps:89/366 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 EGKVCRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGA----------VLKNCSTLPNRLCASCQ 56
            |.|:.::..:..|:.::.:..:|:..|..:|.|.|:.:          ..|.|..|||...:...
Mouse   140 EKKLLKSSSRGKNSNQNSDSLKKKPDTANDHRKSLSHSASDVNKDEIPTRKKCDKLPNNKLSDKG 204

  Fly    57 TCLQQAISFRERCLEVQR-ELLHSQDD-----EDFLRIC------QESPKS-----------VLE 98
            ...|.:    ::|.:|.| ...|:::|     |.....|      :::|.|           ||.
Mouse   205 DKNQTS----KKCEKVCRHSASHTKEDKIQTGEKRKSHCRTPSKPEKAPGSGKPYECNHCGKVLS 265

  Fly    99 QEELELDLAEISIEVERLDDLNEGPIQSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYES 163
            .::..||        .:.....|.|.:.                    ||..|.:|:..:|:...
Mouse   266 HKQGLLD--------HQRTHTGEKPYEC--------------------NECGIAFSQKSHLVVHQ 302

  Fly   164 DTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEF 228
            .|..         .|.|               :.||:||.....:.:...|.:.|.|.|.:.|..
Mouse   303 RTHT---------GEKP---------------YECEQCGKAHGHKHALTDHLRIHTGEKPYKCNE 343

  Fly   229 CEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSY 293
            |...|...:.|.:|:|.||||||::|:.|.:||...|:..:|.||||.|.|:.|.||..||....
Mouse   344 CGKTFRHSSNLMQHLRSHTGEKPYECKECGKSFRYNSSLTEHVRTHTGEIPYECNECGKAFKYGS 408

  Fly   294 ILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRR 334
            .|..||.:|||||.|.|:.|.|.||:.:||..|.|::...:
Mouse   409 SLTKHMRIHTGEKPFECNECGKTFSKKSHLVIHQRTHTKEK 449

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 15/82 (18%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 22/53 (42%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 12/21 (57%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
zf-H2C2_2 295..319 CDD:290200 13/23 (57%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
Zfp37NP_001277279.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..253 23/116 (20%)
KRAB 15..62 CDD:214630
KRAB_A-box <15..42 CDD:143639
COG5048 124..486 CDD:227381 92/366 (25%)
C2H2 Zn finger 257..277 CDD:275368 4/27 (15%)
zf-H2C2_2 270..294 CDD:290200 7/51 (14%)
C2H2 Zn finger 285..305 CDD:275368 5/39 (13%)
zf-H2C2_2 297..319 CDD:290200 8/45 (18%)
C2H2 Zn finger 313..333 CDD:275368 5/19 (26%)
zf-H2C2_2 325..350 CDD:290200 7/24 (29%)
C2H2 Zn finger 341..361 CDD:275368 6/19 (32%)
zf-H2C2_2 353..378 CDD:290200 13/24 (54%)
C2H2 Zn finger 369..389 CDD:275368 7/19 (37%)
zf-H2C2_2 381..406 CDD:290200 12/24 (50%)
C2H2 Zn finger 397..417 CDD:275368 8/19 (42%)
zf-H2C2_2 409..433 CDD:290200 12/23 (52%)
C2H2 Zn finger 425..445 CDD:275368 9/19 (47%)
zf-H2C2_2 437..460 CDD:290200 4/13 (31%)
zf-C2H2 451..473 CDD:278523
C2H2 Zn finger 453..473 CDD:275368
zf-H2C2_2 465..490 CDD:290200
C2H2 Zn finger 481..501 CDD:275368
zf-H2C2_2 494..518 CDD:290200
C2H2 Zn finger 509..529 CDD:275368
zf-H2C2_2 521..545 CDD:290200
C2H2 Zn finger 537..557 CDD:275368
zf-H2C2_2 550..574 CDD:290200
C2H2 Zn finger 565..585 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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