DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF485

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001305069.1 Gene:ZNF485 / 220992 HGNCID:23440 Length:441 Species:Homo sapiens


Alignment Length:355 Identity:94/355 - (26%)
Similarity:143/355 - (40%) Gaps:95/355 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 QQAISFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPI 124
            |:|: :|:..||....|:.       :.:....||.:.:.|:          ..|...::.|.| 
Human    32 QRAL-YRDVMLENYGNLVS-------VGLLSSKPKLITQLEQ----------GAEPWTEVREAP- 77

  Fly   125 QSSGFKVEDILNESKINEDEPNN---------------EDDIDY-----SEMDY------LIYES 163
             |....|||...|:|::..:.:.               |..:|:     :|.:|      .:::.
Human    78 -SGTHAVEDYWFETKMSALKQSTSEASVLGERTKSVMMEKGLDWEGRSSTEKNYKCKECGKVFKY 141

  Fly   164 DTEVDAKQELKSDSENPKKRR-------------NRRNPRDSNRTFFCEECGNHIKDRISFILH- 214
            ::...:.|. ...||.|.|.:             |........:.:.|.|||..:|...:||.| 
Human   142 NSSFISHQR-NHTSEKPHKCKECGIAFMNSSSLLNHHKVHAGKQPYRCIECGKFLKKHSTFINHQ 205

  Fly   215 -------------CKR--------------HRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPF 252
                         |.:              |.|.|.:.|..|...|...|.|.||.|.|:|||||
Human   206 RIHSREKPHKCIECGKTFRKNSILLSHQRIHTGQKPYKCNDCGKAFAQNAALTRHERIHSGEKPF 270

  Fly   253 KCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLF 317
            ||..|.|:|.|.||.|:|::.||.|:|:.|.||..||..|..|.:|..:|||||.:.|..|.|.|
Human   271 KCNKCGRAFRDNSTVLEHQKIHTGEKPYQCNECGKAFRKSSTLISHQRMHTGEKPYHCSKCGKSF 335

  Fly   318 SRYT-----HLTTHYRSNAHR-RNMQKADT 341
             ||:     |..||..:..:: |:..||.|
Human   336 -RYSSSFAGHQKTHSGNKPYQCRDCGKAFT 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 5/16 (31%)
C2H2 Zn finger 198..218 CDD:275368 9/47 (19%)
COG5048 222..>276 CDD:227381 26/53 (49%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:290200 14/23 (61%)
C2H2 Zn finger 254..274 CDD:275368 9/19 (47%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 9/22 (41%)
ZNF485NP_001305069.1 KRAB 11..71 CDD:214630 10/56 (18%)
KRAB 11..50 CDD:279668 6/25 (24%)
COG5048 <124..361 CDD:227381 71/238 (30%)
C2H2 Zn finger 132..152 CDD:275368 1/20 (5%)
C2H2 Zn finger 160..180 CDD:275368 1/19 (5%)
C2H2 Zn finger 188..208 CDD:275368 8/19 (42%)
C2H2 Zn finger 216..236 CDD:275368 1/19 (5%)
zf-H2C2_2 229..253 CDD:290200 6/23 (26%)
C2H2 Zn finger 244..264 CDD:275368 8/19 (42%)
zf-H2C2_2 256..279 CDD:290200 14/22 (64%)
C2H2 Zn finger 272..292 CDD:275368 9/19 (47%)
zf-H2C2_2 287..307 CDD:290200 8/19 (42%)
C2H2 Zn finger 300..320 CDD:275368 8/19 (42%)
zf-H2C2_2 313..337 CDD:290200 11/24 (46%)
C2H2 Zn finger 328..348 CDD:275368 7/20 (35%)
C2H2 Zn finger 356..376 CDD:275368 4/9 (44%)
zf-H2C2_2 372..393 CDD:290200
C2H2 Zn finger 384..404 CDD:275368
zf-H2C2_2 397..419 CDD:290200
C2H2 Zn finger 412..432 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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