DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and Zfp583

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_030098197.1 Gene:Zfp583 / 213011 MGIID:2682297 Length:608 Species:Mus musculus


Alignment Length:260 Identity:73/260 - (28%)
Similarity:119/260 - (45%) Gaps:27/260 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    76 LLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQSSGFKVEDI-LNESK 139
            :.|.:..|..:|.|..|.::|  .:...||:.:.|...||:|   :...|...::.:.: :...|
Mouse   184 ITHKEVPESEIRGCNPSCQAV--HQNAILDVPQCSSTKERID---QSEPQKRSYRKKSVEMKHKK 243

  Fly   140 INEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEECGNH 204
            :..:    :..:..||.: .::...:.:...|.:.: .|.|               :.|.|||..
Mouse   244 VQVE----KRILKCSECE-KVFNQTSSLTLHQRIHT-GEKP---------------YACVECGKA 287

  Fly   205 IKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLK 269
            .....:...|.:.|.|.|.:.|:.|...|...|.|.:|.|.||||||::|:.|.::||..:...:
Mouse   288 FSQSANLAQHKRIHTGEKPYECKECRKAFSQNAHLAQHQRVHTGEKPYQCKECKKAFSQIAHLTQ 352

  Fly   270 HERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRR 334
            |:|.||.||||.|.||..||:....|..|..:|||||.:.|.:|.|.||...:|..|.|.:...|
Mouse   353 HQRIHTGERPFECIECGKAFSNGSFLAQHQRIHTGEKPYVCHVCGKAFSHRGYLIVHQRIHTGER 417

  Fly   335  334
            Mouse   418  417

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity