DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and Zfp677

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_766074.2 Gene:Zfp677 / 210503 MGIID:3053207 Length:634 Species:Mus musculus


Alignment Length:349 Identity:94/349 - (26%)
Similarity:144/349 - (41%) Gaps:51/349 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 TCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPN----RLCASCQTCLQQAISFRER 68
            |..:..|.|:....:.:..:...||.|.   |:.|...|:..    |.|:..........:.|.|
Mouse    60 TVDQHVNTEKESCQYNELGKILHEHFKC---ALYKTSITIETSKNYRCCSDRDVSNDSPNADRHR 121

  Fly    69 CLEVQRELLHSQDDEDFL----RICQE----SPKSVLEQEELELDLAEISIEVERLDDLNEGPIQ 125
            ......|...|:..|...    .|.|:    :.|....|||.:...:.....:::::.:.|.|.|
Mouse   122 STHTGEEPYESKHCEKTFSLRSNISQDQRLYTAKKEHRQEEYDEHFSSTHRLMQQINYIGEKPHQ 186

  Fly   126 ----------SSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENP 180
                      ||...|...::..    ::|...:..|.|      :...|.:...|.|.: .|.|
Mouse   187 CGKCGKCFSTSSNLTVHQRIHTG----EKPYKCNLCDKS------FSQSTTLKTHQRLHT-GEKP 240

  Fly   181 KKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRK 245
            .|               |.|||.......|..:|...|.|.|.:.|:.|:..|...:.|.:|.|.
Mouse   241 YK---------------CRECGMSFPYLSSLKVHQNLHPGAKPYKCKECDKSFTIKSTLIKHQRN 290

  Fly   246 HTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRC 310
            ||||||:.|..|.|||...:....|:|.||.|:|:.||||..|||.|..||.|:.:|||:|.::|
Mouse   291 HTGEKPYTCNVCDRSFRQCANLKTHQRLHTGEKPYKCKECGKAFTQSSSLKKHLNLHTGKKPYKC 355

  Fly   311 DLCDKLFSRYTHLTTHYRSNAHRR 334
            :.|||.|:..:.||||.|.:..::
Mouse   356 EECDKSFTEKSTLTTHKRIHTGKK 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 14/72 (19%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 21/53 (40%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:290200 13/23 (57%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 12/21 (57%)
C2H2 Zn finger 282..302 CDD:275368 11/19 (58%)
zf-H2C2_2 295..319 CDD:290200 12/23 (52%)
C2H2 Zn finger 310..328 CDD:275368 9/17 (53%)
Zfp677NP_766074.2 C2H2 Zn finger 551..571 CDD:275368
C2H2 Zn finger 579..599 CDD:275368
C2H2 Zn finger 612..632 CDD:275368
KRAB 12..52 CDD:366587
C2H2 Zn finger 104..124 CDD:275368 3/19 (16%)
C2H2 Zn finger 132..151 CDD:275368 4/18 (22%)
COG5048 183..600 CDD:227381 71/223 (32%)
C2H2 Zn finger 187..207 CDD:275368 3/19 (16%)
C2H2 Zn finger 215..235 CDD:275368 4/25 (16%)
C2H2 Zn finger 243..263 CDD:275368 6/19 (32%)
C2H2 Zn finger 271..291 CDD:275368 6/19 (32%)
C2H2 Zn finger 299..319 CDD:275368 7/19 (37%)
C2H2 Zn finger 327..347 CDD:275368 11/19 (58%)
C2H2 Zn finger 355..375 CDD:275368 10/19 (53%)
C2H2 Zn finger 383..403 CDD:275368
C2H2 Zn finger 411..431 CDD:275368
C2H2 Zn finger 439..459 CDD:275368
C2H2 Zn finger 467..487 CDD:275368
C2H2 Zn finger 495..515 CDD:275368
C2H2 Zn finger 523..543 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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