DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF846

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001071092.1 Gene:ZNF846 / 162993 HGNCID:27260 Length:533 Species:Homo sapiens


Alignment Length:346 Identity:98/346 - (28%)
Similarity:144/346 - (41%) Gaps:84/346 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 TCLQQAIS--FRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQ-EELELD----LAEISIEVE 114
            |.|.||..  :|:..||..:.|:.....|.|.|    |..|.||| |||...    |.|:.::::
Human    23 TLLDQAQRDLYRDVMLENYKNLIILAGSELFKR----SLMSGLEQMEELRTGVTGVLQELDLQLK 83

  Fly   115 R-----LDDLN--EGPIQSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQE 172
            .     |.|::  ..|   :|.::|......|:.:   :|.....::|..:|:....|.:..|..
Human    84 TKGSPLLQDISAERSP---NGVQLERSNTAEKLYD---SNHSGKVFNEHPFLMTHMITHIGEKTS 142

  Fly   173 ------------------LKSDSEN--PK--------------KRRNRRNP-------RDSNRTF 196
                              .||.:|.  ||              .|:|:.:.       :|..|||
Human   143 EDNQSGKALRKNFPHSFYKKSHAEGKMPKCVKHEKAFNQFPNLTRQNKTHTQEKLCECKDCWRTF 207

  Fly   197 F-------------------CEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRH 242
            .                   |:|||....:....|.|.:.|.|.|.:.|:.|...|.....||.|
Human   208 LNQSSLKLHIRSHNGDKHYVCKECGKAFSNSSHLIGHGRIHSGEKPYVCKECGKAFTQSTGLKLH 272

  Fly   243 IRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKA 307
            ||.|:||||:||:.|.::|:..|....|.|.|:.::|:||.||..|||.|..|..||.:|||||.
Human   273 IRTHSGEKPYKCKECGKAFTHSSYLTDHTRIHSGKKPYVCMECGKAFTRSTGLILHMRIHTGEKP 337

  Fly   308 FRCDLCDKLFSRYTHLTTHYR 328
            :.|..|.|.|...::||.|.|
Human   338 YECKECGKAFIHSSYLTKHVR 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 7/21 (33%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 22/53 (42%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:290200 13/23 (57%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 10/19 (53%)
zf-H2C2_2 295..319 CDD:290200 12/23 (52%)
C2H2 Zn finger 310..328 CDD:275368 7/17 (41%)
ZNF846NP_001071092.1 KRAB 8..67 CDD:214630 17/47 (36%)
KRAB 8..45 CDD:279668 7/21 (33%)
COG5048 106..496 CDD:227381 72/256 (28%)
C2H2 Zn finger 120..136 CDD:275368 2/15 (13%)
C2H2 Zn finger 200..220 CDD:275368 4/19 (21%)
C2H2 Zn finger 228..248 CDD:275368 6/19 (32%)
C2H2 Zn finger 256..276 CDD:275368 8/19 (42%)
zf-H2C2_2 269..293 CDD:290200 14/23 (61%)
C2H2 Zn finger 284..304 CDD:275368 6/19 (32%)
zf-H2C2_2 296..321 CDD:290200 10/24 (42%)
C2H2 Zn finger 312..332 CDD:275368 10/19 (53%)
zf-H2C2_2 328..347 CDD:290200 10/18 (56%)
zf-C2H2 338..360 CDD:278523 8/21 (38%)
C2H2 Zn finger 340..360 CDD:275368 8/19 (42%)
zf-H2C2_2 352..377 CDD:290200 4/7 (57%)
C2H2 Zn finger 368..388 CDD:275368
zf-H2C2_2 381..405 CDD:290200
C2H2 Zn finger 396..416 CDD:275368
zf-H2C2_2 408..433 CDD:290200
C2H2 Zn finger 424..444 CDD:275368
zf-H2C2_2 437..461 CDD:290200
C2H2 Zn finger 452..472 CDD:275368
zf-H2C2_2 464..489 CDD:290200
C2H2 Zn finger 480..500 CDD:275368
zf-H2C2_2 492..517 CDD:290200
C2H2 Zn finger 508..527 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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