DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF681

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_612143.2 Gene:ZNF681 / 148213 HGNCID:26457 Length:645 Species:Homo sapiens


Alignment Length:377 Identity:89/377 - (23%)
Similarity:150/377 - (39%) Gaps:56/377 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VCRTCGKRTNAERSLNIFE---------KRNQ-----------TTLEHIKLLTGA---VLKNCST 46
            :|..|||..|...:|...:         ||.:           ||  |..:.||.   ..:.|..
Human   227 ICEECGKACNQFTNLTTHKIIYTRDKLYKREECSKAFNLSSHITT--HTIIHTGENPYKREECDK 289

  Fly    47 LPNRLCASCQTCLQQAISFRERCLE--------------VQRELLHSQDDEDFLRICQESPKSVL 97
            ..|:   |......:.|..||:..|              .:.:::|:.:..   ..|:|..|:..
Human   290 AFNQ---SLTLTTHKIIHTREKLNEYKECGKAFNQSSHLTRHKIIHTGEKP---YKCEECGKAFN 348

  Fly    98 EQEEL-ELDLAEISIEVERLDDLNEGPIQSSGFKVEDILNESKINEDEPNNEDDID--YSEMDYL 159
            :...| ...:.....:..|.::..:...|||......|::..    ::|...::..  :::..:|
Human   349 QSSHLTRHKIIHTGEKPYRCEECGKAFRQSSHLTTHKIIHTG----EKPYKCEECGKAFNKSSHL 409

  Fly   160 IYESDTEVDAK----QELKSDSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRG 220
            ..........|    ::....|.........:|.....:.:.|||||.......:...|.:.|.|
Human   410 TRHKSIHTGEKPYQCEKCGKASNQSSNLTEHKNIHTEEKPYKCEECGKAFNQFSNLTTHKRIHTG 474

  Fly   221 VKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKEC 285
            .|.:.||.|...|...:.|..|.|.|||||.:||..|.::|...|...:|::.||.|:|:.|:||
Human   475 EKPYKCEECGKAFNQSSILTTHKRIHTGEKSYKCEECGKAFYRSSKLTEHKKIHTGEKPYTCEEC 539

  Fly   286 NNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRRNMQ 337
            ..||..|..|..|.::|||||.::|:.|.|.|::.:|||.|.|.:...:..|
Human   540 GKAFNHSSHLATHKVIHTGEKPYQCEECGKAFNQSSHLTRHKRIHTGEKPYQ 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 20/108 (19%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 20/53 (38%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 11/23 (48%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
ZNF681NP_612143.2 KRAB 4..64 CDD:214630
KRAB 4..43 CDD:279668
C2H2 Zn finger 144..164 CDD:275368
C2H2 Zn finger 176..192 CDD:275368
COG5048 198..610 CDD:227381 89/377 (24%)
C2H2 Zn finger 200..220 CDD:275368
C2H2 Zn finger 285..304 CDD:275368 3/21 (14%)
C2H2 Zn finger 313..332 CDD:275368 0/18 (0%)
zf-H2C2_2 324..349 CDD:290200 4/27 (15%)
C2H2 Zn finger 340..360 CDD:275368 4/19 (21%)
zf-H2C2_2 352..377 CDD:290200 2/24 (8%)
C2H2 Zn finger 368..388 CDD:275368 4/19 (21%)
zf-H2C2_2 380..404 CDD:290200 2/27 (7%)
C2H2 Zn finger 396..416 CDD:275368 1/19 (5%)
C2H2 Zn finger 424..444 CDD:275368 2/19 (11%)
zf-H2C2_2 436..461 CDD:290200 6/24 (25%)
C2H2 Zn finger 452..472 CDD:275368 6/19 (32%)
zf-H2C2_2 464..489 CDD:290200 8/24 (33%)
C2H2 Zn finger 480..500 CDD:275368 7/19 (37%)
zf-H2C2_2 493..517 CDD:290200 12/23 (52%)
C2H2 Zn finger 508..528 CDD:275368 5/19 (26%)
zf-H2C2_2 521..545 CDD:290200 10/23 (43%)
C2H2 Zn finger 536..556 CDD:275368 8/19 (42%)
zf-H2C2_2 548..573 CDD:290200 11/24 (46%)
C2H2 Zn finger 564..584 CDD:275368 9/19 (47%)
zf-H2C2_2 576..601 CDD:290200 6/16 (38%)
C2H2 Zn finger 592..612 CDD:275368 89/377 (24%)
C2H2 Zn finger 620..638 CDD:275368
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 626..645
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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