DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF98

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001092096.1 Gene:ZNF98 / 148198 HGNCID:13174 Length:572 Species:Homo sapiens


Alignment Length:350 Identity:90/350 - (25%)
Similarity:131/350 - (37%) Gaps:82/350 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGA---VLKNCSTLPNRL---------------- 51
            |:.|||..|        |..|.:|  |.::.||.   ..:.|....|||                
Human   212 CKECGKAYN--------EASNLST--HKRIHTGKKPYKCEECGKAFNRLSHLTTHKIIHTGKKPY 266

  Fly    52 -CASCQTCLQQAISFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVER 115
             |..|.....|:.:.      ...:.:|:.:..   ..|:|..::..:..         ::...:
Human   267 KCEECGKAFNQSANL------TTHKRIHTGEKP---YKCEECGRAFSQSS---------TLTAHK 313

  Fly   116 LDDLNEGPIQ----SSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKS- 175
            :....|.|.:    ...|.....|...||          |...|..|...|..........|.: 
Human   314 IIHAGEKPYKCEECGKAFSQSSTLTTHKI----------IHTGEKFYKCEECGKAFSRLSHLTTH 368

  Fly   176 ----DSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTP 236
                ..|.|.|               |||||...|...:...|.:.|.|.|.:.||.|...|...
Human   369 KRIHSGEKPYK---------------CEECGKAFKQSSTLTTHKRIHAGEKFYKCEVCSKAFSRF 418

  Fly   237 AELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLV 301
            :.|..|.|.||||||:||..|.::|:..|....|:..||.|:|:.|:||..||..|..|..|.::
Human   419 SHLTTHKRIHTGEKPYKCEECGKAFNLSSQLTTHKIIHTGEKPYKCEECGKAFNQSSTLSKHKVI 483

  Fly   302 HTGEKAFRCDLCDKLFSRYTHLTTH 326
            |||||.::|:.|.|.|::.:|||||
Human   484 HTGEKPYKCEECGKAFNQSSHLTTH 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 18/90 (20%)
C2H2 Zn finger 198..218 CDD:275368 7/19 (37%)
COG5048 222..>276 CDD:227381 21/53 (40%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 8/16 (50%)
ZNF98NP_001092096.1 KRAB 13..73 CDD:214630
KRAB 13..52 CDD:279668
COG5048 179..563 CDD:227381 89/349 (26%)
C2H2 Zn finger 184..204 CDD:275368
zf-H2C2_2 196..220 CDD:290200 4/7 (57%)
C2H2 Zn finger 212..232 CDD:275368 9/29 (31%)
zf-H2C2_2 224..249 CDD:290200 6/26 (23%)
C2H2 Zn finger 240..260 CDD:275368 4/19 (21%)
zf-H2C2_2 252..277 CDD:290200 2/24 (8%)
C2H2 Zn finger 268..288 CDD:275368 3/25 (12%)
zf-H2C2_2 280..305 CDD:290200 3/33 (9%)
C2H2 Zn finger 296..316 CDD:275368 2/28 (7%)
C2H2 Zn finger 324..344 CDD:275368 4/29 (14%)
zf-H2C2_2 337..361 CDD:290200 7/33 (21%)
zf-C2H2 350..372 CDD:278523 3/21 (14%)
C2H2 Zn finger 352..372 CDD:275368 2/19 (11%)
zf-H2C2_2 364..389 CDD:290200 9/39 (23%)
C2H2 Zn finger 380..400 CDD:275368 7/19 (37%)
C2H2 Zn finger 408..428 CDD:275368 7/19 (37%)
zf-H2C2_2 420..444 CDD:290200 12/23 (52%)
C2H2 Zn finger 436..456 CDD:275368 5/19 (26%)
zf-H2C2_2 449..473 CDD:290200 10/23 (43%)
C2H2 Zn finger 464..484 CDD:275368 8/19 (42%)
zf-H2C2_2 477..501 CDD:290200 11/23 (48%)
C2H2 Zn finger 492..512 CDD:275368 8/16 (50%)
zf-H2C2_2 504..529 CDD:290200 4/4 (100%)
C2H2 Zn finger 520..540 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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