DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF582

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001307300.2 Gene:ZNF582 / 147948 HGNCID:26421 Length:517 Species:Homo sapiens


Alignment Length:170 Identity:59/170 - (34%)
Similarity:97/170 - (57%) Gaps:3/170 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly   160 IYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFI-LHCKRHRGVKE 223
            ::..:...:.|...|:.|.:.:...::|. ....:.:.|:|||... :|||.: :|.:.|.|.|.
Human   248 VHTGEKPYECKDCEKAFSRSSQLIEHQRT-HTGEKPYQCKECGKAF-NRISHLKVHYRIHTGEKP 310

  Fly   224 FGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNA 288
            :.|:.|...|...::|.:|...|||.|.::|:.|.::|:..||.::|:|.||.|:|:.||.|..|
Human   311 YACKECGKTFSHRSQLIQHQTVHTGRKLYECKECGKAFNQGSTLIRHQRIHTGEKPYECKVCGKA 375

  Fly   289 FTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYR 328
            |..|..||.|..:|||||.::|.:|.:.|.|.:|||.|||
Human   376 FRVSSQLKQHQRIHTGEKPYQCKVCGRAFKRVSHLTVHYR 415

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 8/20 (40%)
COG5048 222..>276 CDD:227381 18/53 (34%)
C2H2 Zn finger 226..246 CDD:275368 5/19 (26%)
zf-H2C2_2 238..262 CDD:290200 8/23 (35%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 11/21 (52%)
C2H2 Zn finger 282..302 CDD:275368 9/19 (47%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
ZNF582NP_001307300.2 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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