DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF664

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001191227.1 Gene:ZNF664 / 144348 HGNCID:25406 Length:261 Species:Homo sapiens


Alignment Length:294 Identity:87/294 - (29%)
Similarity:120/294 - (40%) Gaps:43/294 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    55 CQTCLQQAISFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIE-VERLDD 118
            |..|.:   .|.||......:.:|:.:..   ..|.:..|......||.:...:.:.| |.:.||
Human     5 CPMCRE---FFSERADLFMHQKIHTAEKP---HKCDKCDKGFFHISELHIHWRDHTGEKVYKCDD 63

  Fly   119 LNEGPIQSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELK-----SDSE 178
            ..           :|....:|:|..:     .|...|..|..||.....:....|:     ...|
Human    64 CG-----------KDFSTTTKLNRHK-----KIHTVEKPYKCYECGKAFNWSSHLQIHMRVHTGE 112

  Fly   179 NPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHI 243
            .|               :.|.|||....:..:..:|.:.|.|.|.|.||.|...|...:.|..|.
Human   113 KP---------------YVCSECGRGFSNSSNLCMHQRVHTGEKPFKCEECGKAFRHTSSLCMHQ 162

  Fly   244 RKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAF 308
            |.||||||:||..|.::||..|:...|:|.||.|:|:.|..|..||:.|..|..|..||||||.|
Human   163 RVHTGEKPYKCYECGKAFSQSSSLCIHQRVHTGEKPYRCCGCGKAFSQSSSLCIHQRVHTGEKPF 227

  Fly   309 RCDLCDKLFSRYTHLTTHYRSNAHRRNMQKADTI 342
            :||.|.|.||:.|.|..|.|.:...||..|...|
Human   228 KCDECGKAFSQSTSLCIHQRVHTKERNHLKISVI 261

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 5/21 (24%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 24/53 (45%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 14/23 (61%)
C2H2 Zn finger 310..328 CDD:275368 9/17 (53%)
ZNF664NP_001191227.1 C2H2 Zn finger 5..25 CDD:275368 5/22 (23%)
C2H2 Zn finger 33..53 CDD:275368 4/19 (21%)
C2H2 Zn finger 61..81 CDD:275368 5/35 (14%)
zf-H2C2_2 74..97 CDD:404364 6/27 (22%)
C2H2 Zn finger 89..109 CDD:275368 3/19 (16%)
COG5048 <94..256 CDD:227381 63/176 (36%)
C2H2 Zn finger 117..137 CDD:275368 5/19 (26%)
C2H2 Zn finger 145..165 CDD:275368 7/19 (37%)
C2H2 Zn finger 173..193 CDD:275368 7/19 (37%)
C2H2 Zn finger 201..221 CDD:275368 7/19 (37%)
C2H2 Zn finger 229..249 CDD:275368 10/19 (53%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.910

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