DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF572

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_689625.2 Gene:ZNF572 / 137209 HGNCID:26758 Length:529 Species:Homo sapiens


Alignment Length:280 Identity:89/280 - (31%)
Similarity:129/280 - (46%) Gaps:33/280 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    70 LEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQSS------G 128
            :|.:::||.| |...|:.  :||.||....:....:|..:.....:.|.|.|.|.:.|      .
Human     1 MEQEKKLLVS-DSNSFME--RESLKSPFTGDTSMNNLETVHHNNSKADKLKEKPSEWSKRHRPQH 62

  Fly   129 FKVEDILNESKIN--EDEPNNEDDIDYSEMDYLIYESDTEVD------AKQELKS-----DSENP 180
            :|.|| ..|..:.  :||....|.          ||||.:.:      ||:|.|.     ||...
Human    63 YKHED-AKEMPLTWVQDEIWCHDS----------YESDGKSENWGNFIAKEEEKPNHQEWDSGEH 116

  Fly   181 KKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRK 245
            .....::|....:|.:.|.||.....:......|.:.|.|.|.:.|..|...||..:.|.:|:|.
Human   117 TNACVQQNSSFVDRPYKCSECWKSFSNSSHLRTHQRTHSGEKPYKCSECAKCFCNSSHLIQHLRM 181

  Fly   246 HTGEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRC 310
            ||||||::|..|.:|||:.|..:.||||||.|:|:.|.||...|::|..|..|...|||||.:.|
Human   182 HTGEKPYQCGECGKSFSNTSHLIIHERTHTGEKPYKCPECGKRFSSSSHLIQHHRSHTGEKPYEC 246

  Fly   311 DLCDKLFSRYTHLTTHYRSN 330
            .:|.|.||....|..|.|::
Human   247 SVCGKGFSHSYVLIEHQRTH 266

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 1/6 (17%)
C2H2 Zn finger 198..218 CDD:275368 4/19 (21%)
COG5048 222..>276 CDD:227381 25/53 (47%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 9/19 (47%)
zf-H2C2_2 269..291 CDD:290200 12/21 (57%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 7/17 (41%)
ZNF572NP_689625.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62 16/63 (25%)
COG5048 122..494 CDD:227381 56/145 (39%)
C2H2 Zn finger 134..154 CDD:275368 4/19 (21%)
C2H2 Zn finger 162..182 CDD:275368 7/19 (37%)
C2H2 Zn finger 190..210 CDD:275368 9/19 (47%)
C2H2 Zn finger 218..238 CDD:275368 7/19 (37%)
C2H2 Zn finger 246..266 CDD:275368 8/19 (42%)
C2H2 Zn finger 274..294 CDD:275368
C2H2 Zn finger 302..322 CDD:275368
C2H2 Zn finger 330..350 CDD:275368
C2H2 Zn finger 386..406 CDD:275368
C2H2 Zn finger 414..434 CDD:275368
C2H2 Zn finger 442..462 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

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