DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and LOC1280024

DIOPT Version :10

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_061511654.1 Gene:LOC1280024 / 1280024 VectorBaseID:AGAMI1_007475 Length:630 Species:Anopheles gambiae


Alignment Length:505 Identity:96/505 - (19%)
Similarity:161/505 - (31%) Gaps:189/505 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VCRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFRERC 69
            |||.|.:.......::.....|....:.|..:.|..|....:.||::|..|...|:.:..|.::.
Mosquito     4 VCRLCARWGEPFAEMDTILVENLQPNKAIMRMFGFDLSCSPSYPNQVCHECVQSLEYSFVFHQQL 68

  Fly    70 L-------------EVQRELLHSQDDEDFLRICQE----------------------SPKSVLEQ 99
            :             ::::.||..::..:.|:...|                      .||..:|.
Mosquito    69 VNAETLLRTLLEKGQLEQRLLEKKEVGESLQPAVELLEVIPLSDMPQHSEAGYADPHEPKKTVES 133

  Fly   100 -----EELELD------LAE--ISIEVERLDDLN--EGPIQ------------------------ 125
                 |.|..:      .||  |.|::|.:::|.  ..|::                        
Mosquito   134 LSDGGESLPEENGWPDKSAEKVIEIKIEAIEELEIISSPLEAGETSGVPSQGATHTCDDEESLFL 198

  Fly   126 ---SSGFKVEDILNES-KINEDE--------PNNEDDIDYSEMDYLIYESDTEVDA--------- 169
               :||....::.||| :|:..|        ||.      ..:.|.:|.::.|:.|         
Mosquito   199 HRKNSGEAALELSNESNRISNAEQKAIRAIVPNK------CYVCYKVYANEAELTAHLIEHNELL 257

  Fly   170 ----KQ--------ELKSDSENPKKRRNRRNPRD-----------------------SNRTFFCE 199
                :|        |.::.....|...:.|.|.|                       |...:.||
Mosquito   258 PFRCRQCSTTDRVFEYRTIRALNKHLESHRYPFDCGECRLRFRKITARNDHFLRMHMSEGVYTCE 322

  Fly   200 ECGNHIKDRISFILHCKRHRG--VKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFS 262
            .||...:|...|.||...||.  ::.:.|..|...|.:...|:||.:.|..:..|:|:||.|.|:
Mosquito   323 RCGVEFQDARKFRLHMAAHRNMELQRYKCPVCSKAFQSSTLLERHKQIHAAKPLFQCQHCMRGFN 387

  Fly   263 DYSTRLKHERTHTNERPFV-CKE--CNNAFTTSYILKNHMLVH---------------------T 303
            ..|..::|:..|..:...: |.|  |...||.....:.||..|                     |
Mosquito   388 SKSNYMQHKMLHLQQNALIHCGETGCRQNFTNYRDWRRHMKAHYPQEAVYWECRDMLPVTLHDTT 452

  Fly   304 G---------------------------EKAFRCDLCDKLFSRYTHLTTH 326
            |                           .|||||:.||..:|..:.|..|
Mosquito   453 GYPQPCPEAGCTYVAASLPLMFAHYRVHYKAFRCEQCDGRYSNASALRQH 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..76 CDD:462262 14/83 (17%)
C2H2 Zn finger 198..218 CDD:275368 8/19 (42%)
COG5048 222..>276 CDD:227381 16/53 (30%)
C2H2 Zn finger 226..246 CDD:275368 6/19 (32%)
zf-H2C2_2 238..262 CDD:463886 9/23 (39%)
C2H2 Zn finger 254..274 CDD:275368 7/19 (37%)
C2H2 Zn finger 282..302 CDD:275368 7/21 (33%)
zf-H2C2_2 295..319 CDD:463886 12/71 (17%)
C2H2 Zn finger 310..328 CDD:275368 6/17 (35%)
LOC1280024XP_061511654.1 None

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