DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and AgaP_AGAP003942

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_318400.2 Gene:AgaP_AGAP003942 / 1278771 VectorBaseID:AGAP003942 Length:279 Species:Anopheles gambiae


Alignment Length:321 Identity:77/321 - (23%)
Similarity:107/321 - (33%) Gaps:97/321 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTC-GK-----------------RTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLC 52
            ||.| ||                 .|.:..|..:.||..:.|  :|||       :|:.  :..|
Mosquito    18 CRLCLGKESLLGVFATEKPLHNDGHTGSSSSTELVEKIYECT--NIKL-------SCTV--DAGC 71

  Fly    53 ASCQTCLQQAISFRERCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLD 117
            |.|:.|||..                    :||......|.|        ..||.:::..|...|
Mosquito    72 AICRRCLQAV--------------------QDFYHFRVRSNK--------VNDLIQVTTVVANGD 108

  Fly   118 DLNEGPIQSSGFKVEDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVD------AKQELK-S 175
            |.|    .|||       ||:....            |...::..|.|...      |||:.| |
Mosquito   109 DDN----SSSG-------NEAPAKR------------ETTTVVVPSPTTTTTTPLPAAKQQPKPS 150

  Fly   176 DSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFILHCKR-HRGVKEFGCEFCEDRFCTPAEL 239
            ...|..|....|    |||   |..|....:.......|.|| |...::..|..|..:|.....|
Mosquito   151 IVSNASKTTGER----SNR---CRYCPKSFRTVAELAEHGKRTHVAGRQHHCPNCLAQFQHAPSL 208

  Fly   240 KRHIRKHT--GEKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNH 298
            .||:|..:  ....::||.||.||.:......|.|.|..:.|:.|.:|.:.|.....|:.|
Mosquito   209 ARHMRSRSCFAFSKYRCRVCSESFPERDQWADHIRIHAKDFPYQCPDCWSQFKHKATLRRH 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 20/88 (23%)
C2H2 Zn finger 198..218 CDD:275368 5/20 (25%)
COG5048 222..>276 CDD:227381 16/55 (29%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 9/25 (36%)
C2H2 Zn finger 254..274 CDD:275368 8/19 (42%)
zf-H2C2_2 269..291 CDD:290200 7/21 (33%)
C2H2 Zn finger 282..302 CDD:275368 5/17 (29%)
zf-H2C2_2 295..319 CDD:290200 2/4 (50%)
C2H2 Zn finger 310..328 CDD:275368
AgaP_AGAP003942XP_318400.2 zf-AD 17..99 CDD:285071 26/119 (22%)
zf-C2H2_2 166..240 CDD:289522 19/73 (26%)
C2H2 Zn finger 166..187 CDD:275368 5/20 (25%)
C2H2 Zn finger 195..215 CDD:275368 7/19 (37%)
C2H2 Zn finger 225..245 CDD:275368 8/19 (42%)
C2H2 Zn finger 253..269 CDD:275368 4/15 (27%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.000

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