DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and LOC1274478

DIOPT Version :10

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_061498825.1 Gene:LOC1274478 / 1274478 VectorBaseID:AGAMI1_008596 Length:657 Species:Anopheles gambiae


Alignment Length:189 Identity:64/189 - (33%)
Similarity:88/189 - (46%) Gaps:15/189 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly   149 DDIDYSEMDYLIYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEECGNHIKDRISFIL 213
            |.:|  :....|.|.|.|.|..   .|.|:......::.|        .|..||.......:...
Mosquito   480 DTVD--QRTAAIGEDDEEEDGS---GSGSDGAAGGDSKPN--------LCRLCGKTYARPSTLKT 531

  Fly   214 HCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTNER 278
            |.:.|.|.:.:.|..|...|...|.|..|:|.|||:|||:|..|.|.||..|:...|.|||:.||
Mosquito   532 HLRTHSGERPYRCPDCNKSFSQAANLTAHVRTHTGQKPFRCPICDRRFSQSSSVTTHMRTHSGER 596

  Fly   279 PFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNAHRRNMQ 337
            |:.|:.|..||:.|..|..|:.:|:|||.::|.||...||:..:|..|.|  .|..|.|
Mosquito   597 PYRCRACKKAFSDSSTLTKHLRIHSGEKPYQCKLCLLRFSQSGNLNRHMR--VHGNNGQ 653

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..76 CDD:462262
C2H2 Zn finger 198..218 CDD:275368 4/19 (21%)
COG5048 222..>276 CDD:227381 23/53 (43%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:463886 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 8/19 (42%)
C2H2 Zn finger 282..302 CDD:275368 7/19 (37%)
zf-H2C2_2 295..319 CDD:463886 10/23 (43%)
C2H2 Zn finger 310..328 CDD:275368 7/17 (41%)
LOC1274478XP_061498825.1 None
Blue background indicates that the domain is not in the aligned region.

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