DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and AgaP_AGAP003224

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_312933.3 Gene:AgaP_AGAP003224 / 1273899 VectorBaseID:AGAP003224 Length:486 Species:Anopheles gambiae


Alignment Length:474 Identity:107/474 - (22%)
Similarity:186/474 - (39%) Gaps:138/474 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MEGKV-----CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLT--GAV-LKNCSTLPNRLCASCQT 57
            |||:|     ||.|  ....:..:.:|:..::..::...|::  ||: ::........:|.:|..
Mosquito     1 MEGEVILPAACRCC--LLEDKDMVYVFDILDEFEMKISDLISRNGAIKIQERDAFSKHICGNCLN 63

  Fly    58 CLQQAISFRERCLEVQRELLH-----SQDDEDFLRICQESPKSVLEQEEL--------------- 102
            .|..|..|..||.:....|::     :|:|.|.|.:..::......::::               
Mosquito    64 DLAIAERFVLRCRKTNDLLMNLITSDAQEDADALVVRDDTLSETYPEDDVSYVVEASEGQAALYE 128

  Fly   103 ELDLAEI-SIE-VERLDD--------LNEGPIQSSGFKVEDILNESKINEDEPNNED---DIDY- 153
            |:.|||: ||: .|..|:        ...|..|.:|..:..:.::|.:..::...|.   .:|| 
Mosquito   129 EITLAEVQSIDSSEHYDEEPPKVFVTQKAGSSQIAGDTLLQLQHQSTVPVEQSMEETVQVQLDYE 193

  Fly   154 ----SEMDYLIYES----------------------------------DTEVDAKQE-------- 172
                |..|.:|.:.                                  |..|||:|.        
Mosquito   194 HETMSTFDTIITDDTIALSDGLYDDILEDGSLKQEDEELYHLMDQANRDDGVDARQSDSGASTRT 258

  Fly   173 -------LKS-------DSENPKK-RRNRRNPR-----------DSNRTFFCEECGNHIKDRISF 211
                   |||       |:::|.: ..::|.|.           ...::..|..|......:.:.
Mosquito   259 FDFNEDVLKSHEKLCLRDAKHPAEGETSKRTPTLTTDPASGVAPQQKKSLVCSYCNKRWISQSAL 323

  Fly   212 ILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYSTRLKHERTHTN 276
            .:|.:.|.|.:.|||.||:.||.|.:.:..|.|:|:|.||:.|..|.:.|::.|....|...|||
Mosquito   324 TIHLRTHTGERPFGCRFCDKRFKTASAMDLHERRHSGMKPYACSVCDKRFTEGSNLKVHMLQHTN 388

  Fly   277 ERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYRSNA---------- 331
            |:..||..||.||...::|:.||..|||||.:.|::|.:.|::...||.|.|.::          
Mosquito   389 EKSHVCTVCNRAFGRVFLLQLHMRTHTGEKPYVCEVCGRKFTQQCDLTAHRRIHSGDRPYACNLC 453

  Fly   332 ------------HRRNMQK 338
                        |||:.||
Mosquito   454 GKSFIKSSALGTHRRSHQK 472

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 15/79 (19%)
C2H2 Zn finger 198..218 CDD:275368 3/19 (16%)
COG5048 222..>276 CDD:227381 20/53 (38%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:290200 8/23 (35%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
zf-H2C2_2 269..291 CDD:290200 11/21 (52%)
C2H2 Zn finger 282..302 CDD:275368 8/19 (42%)
zf-H2C2_2 295..319 CDD:290200 11/23 (48%)
C2H2 Zn finger 310..328 CDD:275368 6/17 (35%)
AgaP_AGAP003224XP_312933.3 zf-AD 11..85 CDD:285071 15/75 (20%)
C2H2 Zn finger 310..330 CDD:275368 3/19 (16%)
zf-H2C2_2 322..347 CDD:290200 10/24 (42%)
C2H2 Zn finger 338..358 CDD:275368 8/19 (42%)
zf-H2C2_2 354..374 CDD:290200 8/19 (42%)
C2H2 Zn finger 366..386 CDD:275368 5/19 (26%)
zf-H2C2_2 378..403 CDD:290200 11/24 (46%)
C2H2 Zn finger 394..414 CDD:275368 8/19 (42%)
zf-H2C2_2 407..431 CDD:290200 11/23 (48%)
C2H2 Zn finger 422..442 CDD:275368 7/19 (37%)
zf-H2C2_2 434..457 CDD:290200 4/22 (18%)
C2H2 Zn finger 450..470 CDD:275368 3/19 (16%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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