DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and ZNF816

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_001026835.1 Gene:ZNF816 / 125893 HGNCID:26995 Length:651 Species:Homo sapiens


Alignment Length:340 Identity:89/340 - (26%)
Similarity:141/340 - (41%) Gaps:58/340 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGKRTNAERSLNIFEKRNQTTLEHIKLLTGAVLKNCSTLPNRLCASCQTCLQQAISFRERCL 70
            |..|||..:.:.||..          |.:|.||.....|:........:....:.:||...|:..
Human   315 CNECGKTFSEKSSLRC----------HRRLHTGEKPYKCNECGKTFGRNSALVIHKAIHTGEKPY 369

  Fly    71 EVQRELLHSQDDEDFLRICQESPKSVLEQEELE----LDLAEISIEVERLDDLNEGPIQSSGFKV 131
            :                 |.|..|:..::..|:    |...|...:.|..|::.   |:.|..: 
Human   370 K-----------------CNECGKTFSQKSSLQCHHILHTGEKPYKCEECDNVY---IRRSHLE- 413

  Fly   132 EDILNESKINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENPKK--RRNRRNPRDSN- 193
                ...||:..|.:.:     .::...::.||:.:...|.:.: .|.|.|  :..|...|.|: 
Human   414 ----RHRKIHTGEGSYK-----CKVCDKVFRSDSYLAEHQRVHT-GEKPYKCNKCGRSFSRKSSL 468

  Fly   194 ----------RTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTG 248
                      :.:.|.|||.....|.:...|.:.|.|.|.:.||.|:..|...:.|:||.|.|||
Human   469 QYHHTLHTGEKPYTCNECGKVFSRRENLARHHRLHAGEKPYKCEECDKVFSRRSHLERHRRIHTG 533

  Fly   249 EKPFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLC 313
            |||:||:.|.::|...|....|.|.||.|:|:.|.:|...|....||..|..||||||.::|:.|
Human   534 EKPYKCKVCDKAFRSDSCLANHTRVHTGEKPYKCNKCAKVFNQKGILAQHQRVHTGEKPYKCNEC 598

  Fly   314 DKLFSRYTHLTTHYR 328
            .|:|::...|..|.|
Human   599 GKVFNQKASLAKHQR 613

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 14/70 (20%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 23/53 (43%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:290200 13/23 (57%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 9/21 (43%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
zf-H2C2_2 295..319 CDD:290200 12/23 (52%)
C2H2 Zn finger 310..328 CDD:275368 6/17 (35%)
ZNF816NP_001026835.1 KRAB 24..64 CDD:307490
C2H2 Zn finger 232..251 CDD:275368
C2H2 Zn finger 259..279 CDD:275368
COG5048 283..650 CDD:227381 89/340 (26%)
C2H2 Zn finger 287..307 CDD:275368
C2H2 Zn finger 315..335 CDD:275368 7/29 (24%)
C2H2 Zn finger 343..363 CDD:275368 2/19 (11%)
C2H2 Zn finger 371..391 CDD:275368 4/19 (21%)
C2H2 Zn finger 399..419 CDD:275368 5/27 (19%)
C2H2 Zn finger 427..447 CDD:275368 3/19 (16%)
C2H2 Zn finger 455..475 CDD:275368 3/19 (16%)
C2H2 Zn finger 483..503 CDD:275368 6/19 (32%)
C2H2 Zn finger 511..531 CDD:275368 8/19 (42%)
C2H2 Zn finger 539..559 CDD:275368 6/19 (32%)
C2H2 Zn finger 567..587 CDD:275368 6/19 (32%)
C2H2 Zn finger 595..615 CDD:275368 7/19 (37%)
C2H2 Zn finger 623..643 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.