DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and ZNF443

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:NP_005806.3 Gene:ZNF443 / 10224 HGNCID:20878 Length:671 Species:Homo sapiens


Alignment Length:277 Identity:81/277 - (29%)
Similarity:127/277 - (45%) Gaps:51/277 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    68 RCLEVQRELLHSQDDEDFLRICQESPKSVLEQEELELDLAEISIEVERLDDLNEGPIQSSGFKVE 132
            ||..::| .:.|:|...    |.|:...:.:....:..|..:            ||.:|| .:.|
Human    64 RCRMLER-FVESKDGTQ----CGETSSQIQDSIVTKNTLPGV------------GPCESS-MRGE 110

  Fly   133 DILNESKIN-------EDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDS-----ENPKKRRN 185
            .::..|.:|       ..:|:     :|.|..   .:.||.   ||..|:.|     :..::...
Human   111 KVMGHSSLNCYIRVGAGHKPH-----EYHECG---EKPDTH---KQRGKAFSYHNSFQTHERLHT 164

  Fly   186 RRNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEK 250
            .:.|.|      |:|||.......:...|....||...:.|:.|...|..|:.|..|.|.|||||
Human   165 GKKPYD------CKECGKSFSSLGNLQRHMAVQRGDGPYKCKLCGKAFFWPSLLHMHERTHTGEK 223

  Fly   251 PFKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFT--TSYILKNHMLVHTGEKAFRCDLC 313
            |::|:.||::||.||:.|:||||||.|:|:.||:|:.||.  :||:  .|...|||||.::|..|
Human   224 PYECKQCSKAFSFYSSYLRHERTHTGEKPYECKQCSKAFPFYSSYL--RHERTHTGEKPYKCKQC 286

  Fly   314 DKLFSRYTHLTTHYRSN 330
            .|.|...:....|.|::
Human   287 SKAFPDSSSCLIHERTH 303

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 3/8 (38%)
C2H2 Zn finger 198..218 CDD:275368 5/19 (26%)
COG5048 222..>276 CDD:227381 26/53 (49%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 11/19 (58%)
zf-H2C2_2 269..291 CDD:290200 13/23 (57%)
C2H2 Zn finger 282..302 CDD:275368 8/21 (38%)
zf-H2C2_2 295..319 CDD:290200 10/23 (43%)
C2H2 Zn finger 310..328 CDD:275368 5/17 (29%)
ZNF443NP_005806.3 KRAB 3..43 CDD:307490
C2H2 Zn finger 133..163 CDD:275368 8/35 (23%)
C2H2 Zn finger 171..191 CDD:275368 5/19 (26%)
COG5048 196..579 CDD:227381 48/110 (44%)
C2H2 Zn finger 199..219 CDD:275368 7/19 (37%)
C2H2 Zn finger 227..247 CDD:275368 11/19 (58%)
C2H2 Zn finger 255..275 CDD:275368 8/21 (38%)
C2H2 Zn finger 283..303 CDD:275368 6/19 (32%)
C2H2 Zn finger 311..331 CDD:275368
C2H2 Zn finger 339..359 CDD:275368
C2H2 Zn finger 367..387 CDD:275368
C2H2 Zn finger 395..415 CDD:275368
C2H2 Zn finger 423..443 CDD:275368
C2H2 Zn finger 451..471 CDD:275368
C2H2 Zn finger 506..526 CDD:275368
C2H2 Zn finger 534..554 CDD:275368
C2H2 Zn finger 562..582 CDD:275368
C2H2 Zn finger 590..610 CDD:275368
C2H2 Zn finger 618..638 CDD:275368
C2H2 Zn finger 651..671 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 52 0.118 Domainoid score I11437
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.000

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