DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and LOC101732639

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_031749205.1 Gene:LOC101732639 / 101732639 -ID:- Length:765 Species:Xenopus tropicalis


Alignment Length:402 Identity:108/402 - (26%)
Similarity:158/402 - (39%) Gaps:98/402 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRTCGK----RTNAERSLNI---------------FEKRNQTTLEHIKLLTG------------- 38
            |..|||    :.:.:|.|.:               |.::...| :|.||..|             
 Frog   308 CTECGKSFSEKGSLQRHLKVHTGEKPFKCTECGKGFTRKIHLT-KHHKLHIGVSKGELPVPEEEV 371

  Fly    39 ---------AVLKNCSTLP---------------NRL-CASCQTCLQQAISFRERCLEVQRELLH 78
                     |::.:...||               |.| |....|.::.........|:|:.|...
 Frog   372 CWSWLEDGCAIISDIGQLPITNMDPHSPLRQFRENPLDCRRHGTAIKTENGAEPEILQVKIEKSD 436

  Fly    79 SQDDEDFLRICQESPKSVLEQEE--LELDLAE-ISIEVERLDDLNEGPIQSSGFK--VEDILNES 138
            |:|:.|       ..:|:.|:::  .:||.|. |.|:.|         :.||...  ..:|:| .
 Frog   437 SEDEGD-------DGESLKERKQGNDKLDSAPLIRIKTE---------MHSSSLSDCAPEIIN-I 484

  Fly   139 KINEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSEN-----------------PKKRRNR 186
            ||.:||.:.||::. :|........|.|.|:|.|.::.:|.                 |......
 Frog   485 KIEKDESDCEDNVS-TEGSAAHMHPDGEADSKCESRTRAEGGAKSSHFICCKCGESFAPSSDHTH 548

  Fly   187 RNPRDSNRTFFCEECGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKP 251
            .......|.|.|.|||.....:.|...|...|.|.|.|.|..|.:||...:.|..|.|.||||||
 Frog   549 ICAPTGERLFSCAECGKSFSTKGSLHRHKTVHTGEKPFACVKCGERFSRKSYLHNHQRAHTGEKP 613

  Fly   252 FKCRHCSRSFSDYSTRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKL 316
            |.|..|.::||...:..:|:..||.|:.|.|.||...|:....|..|:.||||||.|.|..|.|.
 Frog   614 FNCTECGKNFSRKGSLQRHQIVHTGEKRFTCTECGKDFSEKTTLHIHLRVHTGEKPFTCSDCGKT 678

  Fly   317 FSRYTHLTTHYR 328
            ||:.::|.|||:
 Frog   679 FSQKSNLYTHYK 690

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871 22/127 (17%)
C2H2 Zn finger 198..218 CDD:275368 6/19 (32%)
COG5048 222..>276 CDD:227381 22/53 (42%)
C2H2 Zn finger 226..246 CDD:275368 7/19 (37%)
zf-H2C2_2 238..262 CDD:290200 12/23 (52%)
C2H2 Zn finger 254..274 CDD:275368 5/19 (26%)
zf-H2C2_2 269..291 CDD:290200 9/21 (43%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
zf-H2C2_2 295..319 CDD:290200 13/23 (57%)
C2H2 Zn finger 310..328 CDD:275368 8/17 (47%)
LOC101732639XP_031749205.1 C2H2 Zn finger 728..748 CDD:275368
COG5048 <196..>321 CDD:227381 4/12 (33%)
C2H2 Zn finger 196..216 CDD:275368
C2H2 Zn finger 224..244 CDD:275368
zf-H2C2_2 237..261 CDD:404364
C2H2 Zn finger 252..272 CDD:275368
C2H2 Zn finger 280..300 CDD:275368
COG5048 303..745 CDD:227381 108/402 (27%)
C2H2 Zn finger 308..328 CDD:275368 6/19 (32%)
C2H2 Zn finger 336..356 CDD:275368 4/20 (20%)
C2H2 Zn finger 533..552 CDD:275368 1/18 (6%)
C2H2 Zn finger 560..580 CDD:275368 6/19 (32%)
C2H2 Zn finger 588..608 CDD:275368 7/19 (37%)
C2H2 Zn finger 616..636 CDD:275368 5/19 (26%)
C2H2 Zn finger 644..664 CDD:275368 6/19 (32%)
C2H2 Zn finger 672..692 CDD:275368 9/19 (47%)
C2H2 Zn finger 700..720 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 108 1.000 Inparanoid score I4763
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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