DRSC/TRiP Functional Genomics Resources

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Protein Alignment ranshi and si:dkey-237m9.1

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_017211095.1 Gene:si:dkey-237m9.1 / 100329377 ZFINID:ZDB-GENE-131118-30 Length:359 Species:Danio rerio


Alignment Length:258 Identity:76/258 - (29%)
Similarity:119/258 - (46%) Gaps:35/258 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 QDDEDFLRICQESPKSVLEQEEL--ELDLAEISIEVERLDDLNEGPIQSSGFKVEDILNESK--- 139
            ::.|| |:| :|:  ..::||:|  :.||..:..|..:.:::.|        |.:||:.:.|   
Zfish     6 EESED-LKI-EET--FTVKQEDLQEQTDLMVLKEETHQWNEMEE--------KHQDIMTDEKRTL 58

  Fly   140 ----INEDEPNNEDDIDYSEMDYLIYESDTEVDAKQELKSDSENPKKRRNRRNPRDSNRTFFCEE 200
                .:...|...             :|.....:||..|:.|:.||...:.| .....:|..|::
Zfish    59 TKKTSSRGRPRKS-------------KSKCNFSSKQRRKTFSQKPKLDVHMR-VHKGEKTCTCKQ 109

  Fly   201 CGNHIKDRISFILHCKRHRGVKEFGCEFCEDRFCTPAELKRHIRKHTGEKPFKCRHCSRSFSDYS 265
            ||.......:..:|.:.|.|.|.:.||.|...||.....|.|:|.||||:|:.|:.|.:||....
Zfish   110 CGKSFYTIGNLTVHMRIHTGEKPYTCEQCGKSFCQKENFKTHMRIHTGERPYTCQQCGKSFYHAG 174

  Fly   266 TRLKHERTHTNERPFVCKECNNAFTTSYILKNHMLVHTGEKAFRCDLCDKLFSRYTHLTTHYR 328
            ..:.|.|.||.|||:.|.:|..:|..:..|:.||..|||||.|.|..|.|.|.:..:|..|.|
Zfish   175 NLIMHMRIHTEERPYSCPQCGKSFKQNGNLEVHMRTHTGEKRFTCTQCGKSFVKKQNLDIHMR 237

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368 4/19 (21%)
COG5048 222..>276 CDD:227381 21/53 (40%)
C2H2 Zn finger 226..246 CDD:275368 8/19 (42%)
zf-H2C2_2 238..262 CDD:290200 11/23 (48%)
C2H2 Zn finger 254..274 CDD:275368 6/19 (32%)
zf-H2C2_2 269..291 CDD:290200 10/21 (48%)
C2H2 Zn finger 282..302 CDD:275368 6/19 (32%)
zf-H2C2_2 295..319 CDD:290200 13/23 (57%)
C2H2 Zn finger 310..328 CDD:275368 6/17 (35%)
si:dkey-237m9.1XP_017211095.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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