DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment ranshi and si:ch211-223a21.4

DIOPT Version :9

Sequence 1:NP_649824.1 Gene:ranshi / 41041 FlyBaseID:FBgn0037620 Length:346 Species:Drosophila melanogaster
Sequence 2:XP_009299145.1 Gene:si:ch211-223a21.4 / 100003496 ZFINID:ZDB-GENE-110913-57 Length:383 Species:Danio rerio


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ranshiNP_649824.1 zf-AD 5..77 CDD:214871
C2H2 Zn finger 198..218 CDD:275368
COG5048 222..>276 CDD:227381
C2H2 Zn finger 226..246 CDD:275368
zf-H2C2_2 238..262 CDD:290200
C2H2 Zn finger 254..274 CDD:275368
zf-H2C2_2 269..291 CDD:290200
C2H2 Zn finger 282..302 CDD:275368
zf-H2C2_2 295..319 CDD:290200
C2H2 Zn finger 310..328 CDD:275368
si:ch211-223a21.4XP_009299145.1 C2H2 Zn finger 80..99 CDD:275368
C2H2 Zn finger 107..127 CDD:275368
zf-H2C2_2 119..144 CDD:290200
C2H2 Zn finger 135..155 CDD:275368
zf-H2C2_2 148..172 CDD:290200
C2H2 Zn finger 163..183 CDD:275368
zf-H2C2_2 176..200 CDD:290200
COG5048 <188..378 CDD:227381
C2H2 Zn finger 191..211 CDD:275368
zf-H2C2_2 203..228 CDD:290200
C2H2 Zn finger 219..239 CDD:275368
C2H2 Zn finger 271..291 CDD:275368
C2H2 Zn finger 299..316 CDD:275368
C2H2 Zn finger 327..347 CDD:275368
zf-C2H2 353..375 CDD:278523
C2H2 Zn finger 355..375 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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