DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8159 and si:ch211-79k12.2

DIOPT Version :9

Sequence 1:NP_649823.2 Gene:CG8159 / 41040 FlyBaseID:FBgn0037619 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001313520.1 Gene:si:ch211-79k12.2 / 568844 ZFINID:ZDB-GENE-131121-535 Length:555 Species:Danio rerio


Alignment Length:300 Identity:88/300 - (29%)
Similarity:124/300 - (41%) Gaps:80/300 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CLRSQKIFEESLVRNEEDTFRSSVRRSARSQRQRHEDTAPKTPASPLEVMIKLESLSNGDEEDDG 133
            ||..|:.|...                  :|..|||                     .|..:.||
Zfish   250 CLSCQRTFPTC------------------AQLLRHE---------------------QGHAQQDG 275

  Fly   134 IDHLDSCNEADMELAIKAMSSSTEDDGTTSPVRLKRTRR--RGLKKGGKGENRTKVTLPVFFCDQ 196
            :..| ||...:...              ..|.:|.:.:|  ...|.||            |.|.:
Zfish   276 LQQL-SCMHCNASF--------------PRPSQLLQHQRTQHATKAGG------------FLCAE 313

  Fly   197 CGNNITGKSSFDRHLRKHSGIRPFQCELCPARFLSSGELKGHQVMHTGDRKFQCRYCDRTYVNYS 261
            ||......|:...||..|:|.||:.|..|...|..||.||.|:.:|||:|.:.|.||.|.:.:.:
Zfish   314 CGRAFNSHSNLRIHLNVHTGARPYICTNCGKSFSQSGALKIHRRIHTGERPYTCSYCGRGFPHLA 378

  Fly   262 GRLRHERTHTNDRPFICAQCGKSFTNSYILKNHMLIHTGERLFRCELCHRSFARPTHLKTHFRSN 326
            |...|:|.||.::|:||.||||.||.|..||.|..||||||.|.|.||.:||:..:.::.|.|: 
Zfish   379 GVRAHQRIHTGEKPYICGQCGKCFTQSGALKIHTRIHTGERPFVCGLCGKSFSNRSGIRFHHRT- 442

  Fly   327 THKHNLE------KSMADAGGVQLSPSQ-----SADQVKF 355
            .|...:|      .|:|.:...|:|..|     :.:|:.|
Zfish   443 VHGIVMEPNSVGRPSLAASASSQVSDIQRVQVSAVNQIHF 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8159NP_649823.2 zf-AD 5..78 CDD:214871 4/8 (50%)
C2H2 Zn finger 194..214 CDD:275368 6/19 (32%)
COG5048 <197..322 CDD:227381 55/124 (44%)
zf-H2C2_2 206..231 CDD:290200 9/24 (38%)
C2H2 Zn finger 222..242 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
zf-H2C2_2 265..287 CDD:290200 12/21 (57%)
C2H2 Zn finger 278..298 CDD:275368 11/19 (58%)
zf-H2C2_2 291..315 CDD:290200 15/23 (65%)
C2H2 Zn finger 306..328 CDD:275368 7/21 (33%)
si:ch211-79k12.2NP_001313520.1 C2H2 Zn finger 281..302 CDD:275368 4/34 (12%)
C2H2 Zn finger 311..331 CDD:275368 6/19 (32%)
zf-H2C2_2 323..348 CDD:290200 9/24 (38%)
C2H2 Zn finger 339..359 CDD:275368 8/19 (42%)
zf-H2C2_2 351..374 CDD:290200 11/22 (50%)
C2H2 Zn finger 367..387 CDD:275368 7/19 (37%)
zf-H2C2_2 380..404 CDD:290200 12/23 (52%)
C2H2 Zn finger 395..415 CDD:275368 11/19 (58%)
zf-H2C2_2 407..432 CDD:290200 15/24 (63%)
C2H2 Zn finger 423..442 CDD:275368 6/18 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.