DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8159 and si:ch211-79k12.2

DIOPT Version :10

Sequence 1:NP_649823.2 Gene:CG8159 / 41040 FlyBaseID:FBgn0037619 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001313520.1 Gene:si:ch211-79k12.2 / 568844 ZFINID:ZDB-GENE-131121-535 Length:555 Species:Danio rerio


Alignment Length:300 Identity:88/300 - (29%)
Similarity:124/300 - (41%) Gaps:80/300 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    69 CLRSQKIFEESLVRNEEDTFRSSVRRSARSQRQRHEDTAPKTPASPLEVMIKLESLSNGDEEDDG 133
            ||..|:.|...                  :|..|||                     .|..:.||
Zfish   250 CLSCQRTFPTC------------------AQLLRHE---------------------QGHAQQDG 275

  Fly   134 IDHLDSCNEADMELAIKAMSSSTEDDGTTSPVRLKRTRR--RGLKKGGKGENRTKVTLPVFFCDQ 196
            :..| ||...:...              ..|.:|.:.:|  ...|.||            |.|.:
Zfish   276 LQQL-SCMHCNASF--------------PRPSQLLQHQRTQHATKAGG------------FLCAE 313

  Fly   197 CGNNITGKSSFDRHLRKHSGIRPFQCELCPARFLSSGELKGHQVMHTGDRKFQCRYCDRTYVNYS 261
            ||......|:...||..|:|.||:.|..|...|..||.||.|:.:|||:|.:.|.||.|.:.:.:
Zfish   314 CGRAFNSHSNLRIHLNVHTGARPYICTNCGKSFSQSGALKIHRRIHTGERPYTCSYCGRGFPHLA 378

  Fly   262 GRLRHERTHTNDRPFICAQCGKSFTNSYILKNHMLIHTGERLFRCELCHRSFARPTHLKTHFRSN 326
            |...|:|.||.::|:||.||||.||.|..||.|..||||||.|.|.||.:||:..:.::.|.|: 
Zfish   379 GVRAHQRIHTGEKPYICGQCGKCFTQSGALKIHTRIHTGERPFVCGLCGKSFSNRSGIRFHHRT- 442

  Fly   327 THKHNLE------KSMADAGGVQLSPSQ-----SADQVKF 355
            .|...:|      .|:|.:...|:|..|     :.:|:.|
Zfish   443 VHGIVMEPNSVGRPSLAASASSQVSDIQRVQVSAVNQIHF 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8159NP_649823.2 zf-AD 5..78 CDD:214871 4/8 (50%)
C2H2 Zn finger 194..214 CDD:275368 6/19 (32%)
COG5048 <197..322 CDD:227381 55/124 (44%)
C2H2 Zn finger 222..242 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 7/19 (37%)
C2H2 Zn finger 278..298 CDD:275368 11/19 (58%)
C2H2 Zn finger 306..328 CDD:275368 7/21 (33%)
si:ch211-79k12.2NP_001313520.1 SUF4-like 281..>331 CDD:411020 14/75 (19%)
C2H2 Zn finger 281..302 CDD:411020 4/34 (12%)
C2H2 Zn finger 281..302 CDD:275368 4/34 (12%)
C2H2 Zn finger 311..331 CDD:411020 6/19 (32%)
C2H2 Zn finger 311..331 CDD:275368 6/19 (32%)
zf-C2H2 337..359 CDD:395048 8/21 (38%)
C2H2 Zn finger 339..359 CDD:275368 8/19 (42%)
zf-H2C2_2 351..374 CDD:463886 11/22 (50%)
C2H2 Zn finger 367..387 CDD:275368 7/19 (37%)
zf-C2H2 393..415 CDD:395048 12/21 (57%)
C2H2 Zn finger 395..415 CDD:275368 11/19 (58%)
zf-H2C2_2 407..432 CDD:463886 15/24 (63%)
C2H2 Zn finger 423..442 CDD:275368 6/18 (33%)

Return to query results.
Submit another query.