DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8159 and Zif

DIOPT Version :9

Sequence 1:NP_649823.2 Gene:CG8159 / 41040 FlyBaseID:FBgn0037619 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001189188.1 Gene:Zif / 40795 FlyBaseID:FBgn0037446 Length:388 Species:Drosophila melanogaster


Alignment Length:396 Identity:102/396 - (25%)
Similarity:170/396 - (42%) Gaps:86/396 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRVCASSTDNSKSL-KLFNSGACKVLQQINLLTGVL---LQCEPGLPDWMCETCQTDLKSAISFR 66
            ||||.:.::..:.| ::...|.....:.:..|.||.   |.....:||.:|::|:.:|..|..||
  Fly    10 CRVCLAQSERLQRLDEIREEGEESPNEMLIQLLGVSYSNLNDREHIPDGICKSCKVELNMAYQFR 74

  Fly    67 DRCLRSQKIFEESL----VRNEEDTFRSSVRRSARSQRQRHEDTAPKTPASPLEVMIKLESLSNG 127
            ::.||.|...||..    :.:|.|..  .::....||:|..|:            |..||..:.|
  Fly    75 EKALRKQMEIEEYCRELGLLDESDVM--MIKEEDGSQQQCDEE------------MYILEETTTG 125

  Fly   128 DEE----------------------DDGIDHLD-----SCNEADMELAIKAMSSSTE-------- 157
            :||                      .|.|::|:     ..|....|:.:::.....|        
  Fly   126 EEEHQEEKGHEEYLEVDTSDQQECIGDTIEYLEDNYTIEMNSDQTEIVLESEKQYEETPSQQLAL 190

  Fly   158 DDGTTSPVRLKRTR-RRGL---------KKGGKGENRTKVTLPVFFCDQCGNNITGKSSFDRHLR 212
            .:...:.::.:|.| ||||         :|||            :.||.|||....:.....|.|
  Fly   191 QEAAKASLKARRGRVRRGLNSLTTSDGTEKGG------------YICDVCGNFYEKRGRMMEHRR 243

  Fly   213 KHSGIRPFQCELCPARFLSSGELKGHQVMHTGDRKFQCRYCDRTYVNYSGRLRHERTHTNDRPFI 277
            :|.||..:.||||.|:|....:|:.|...|||.:.::|.:|.|.:...|....||..|...:|::
  Fly   244 RHDGICQYACELCDAKFQVREQLRKHMYSHTGSKPYKCSFCSRQFFYESVLKSHENVHRGIKPYV 308

  Fly   278 CAQCGKSFTNSYILKNHMLIHTGERLFRCELCHRSFARPTHLKTHFRSNTHKH--NLEKSM---- 336
            |..|.|:|..::.|..|.|||:..:|:||:.|::.|....|::.|..:..|::  .|.:||    
  Fly   309 CKVCDKAFAYAHSLTKHELIHSDIKLYRCDYCNKDFRLLHHMRQHEETKLHQNAVMLAESMKVEM 373

  Fly   337 -ADAGG 341
             |:.||
  Fly   374 VAEQGG 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8159NP_649823.2 zf-AD 5..78 CDD:214871 21/75 (28%)
C2H2 Zn finger 194..214 CDD:275368 7/19 (37%)
COG5048 <197..322 CDD:227381 42/124 (34%)
zf-H2C2_2 206..231 CDD:290200 11/24 (46%)
C2H2 Zn finger 222..242 CDD:275368 8/19 (42%)
C2H2 Zn finger 250..270 CDD:275368 6/19 (32%)
zf-H2C2_2 265..287 CDD:290200 8/21 (38%)
C2H2 Zn finger 278..298 CDD:275368 7/19 (37%)
zf-H2C2_2 291..315 CDD:290200 10/23 (43%)
C2H2 Zn finger 306..328 CDD:275368 5/21 (24%)
ZifNP_001189188.1 zf-AD 9..87 CDD:285071 22/76 (29%)
C2H2 Zn finger 225..245 CDD:275368 7/19 (37%)
COG5048 <250..369 CDD:227381 37/118 (31%)
C2H2 Zn finger 253..273 CDD:275368 8/19 (42%)
zf-H2C2_2 266..288 CDD:290200 8/21 (38%)
C2H2 Zn finger 281..301 CDD:275368 6/19 (32%)
zf-H2C2_2 294..318 CDD:290200 8/23 (35%)
C2H2 Zn finger 309..329 CDD:275368 7/19 (37%)
C2H2 Zn finger 337..353 CDD:275368 4/15 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 50 1.000 Domainoid score I11351
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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