DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8159 and prg

DIOPT Version :10

Sequence 1:NP_649823.2 Gene:CG8159 / 41040 FlyBaseID:FBgn0037619 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_609232.2 Gene:prg / 34177 FlyBaseID:FBgn0285971 Length:558 Species:Drosophila melanogaster


Alignment Length:428 Identity:98/428 - (22%)
Similarity:148/428 - (34%) Gaps:102/428 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NVCRVCASSTDNSKSLKLFNSGA--CK---VLQQINLLTGVLLQCEPGLPDWMCETCQTDLKSAI 63
            :.||:|..:|| ..||.:|:...  ||   :.:....|..|.......|.:.:|..|...|:.|.
  Fly    15 STCRLCHHNTD-PNSLNIFDDTVQFCKDVSIAEVSKSLWSVQYDRNECLSELICSRCLEILEEAF 78

  Fly    64 SFRDRCLRSQKIFEESLVRNEEDTFRSSVRRSARSQRQRHEDTAPKTPASP---------LEVMI 119
            ..|......::..:|.|....:|                |....|....:|         :.|.:
  Fly    79 ELRKGMQEREQSLQEQLKEMIKD----------------HPKHRPGLNGNPGVFVPEEGCIIVEV 127

  Fly   120 KLESLSNGDEED-----------------------DGIDHLDSCNEAD------MELAIKAMSSS 155
            ..|:|:...||:                       |..|..|..|..|      |:.|..|...|
  Fly   128 DPENLAESSEEEFALGSDGEYENYDDDDEEEEEDYDEEDEEDGQNGEDVDMPLGMDAAQMAAQQS 192

  Fly   156 TEDDGTTSPVRLKRTRRRGLKKGGKGENRTKVTLPVFFCDQCGNNITGKSSFDRH-LRKHSGIRP 219
            ..::..|:..|.||                     .|.|..|....|..:....| |..|....|
  Fly   193 VANNANTTEARPKR---------------------AFLCQYCDLGFTLPAECQEHELAAHDPNAP 236

  Fly   220 FQCELCPARFLSSGELKGH-QVMHTGDRKFQCRYCDRTYVNYSGRLRHERTHTNDRPFICAQCGK 283
            :.|..|..:.::...|..| :.:|..||.:.|.:|.:.:|..|...:|...||..|||.|..|.|
  Fly   237 YCCNFCNIKLVTRPALISHIKTLHDPDRPYVCAHCRKGFVRRSDLKKHTIVHTGVRPFTCNVCSK 301

  Fly   284 SFTNSYILKNHMLIHTGERLFRCELCHRSFARPTHLKTHFRSNTHKHNLEKSMADAGGVQLSPSQ 348
            ||:.:..|..||.||:|.:.|.|:.|.|||.....:..|.||    |...|:. ..|....|.|:
  Fly   302 SFSRNTNLTKHMRIHSGVKPFVCQQCPRSFQTAVEMMRHTRS----HGEVKAF-QCGRCPYSFSR 361

  Fly   349 SADQVKFVTEKEPEAEADAFTIEVPLPAEQEQDESLGL 386
               :.|.:..::.....|           .||.:.:||
  Fly   362 ---RDKLIAHQQVHTRRD-----------MEQQQQMGL 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8159NP_649823.2 zf-AD 5..78 CDD:214871 18/77 (23%)
C2H2 Zn finger 194..214 CDD:275368 5/20 (25%)
COG5048 <197..322 CDD:227381 40/126 (32%)
C2H2 Zn finger 222..242 CDD:275368 4/20 (20%)
C2H2 Zn finger 250..270 CDD:275368 5/19 (26%)
C2H2 Zn finger 278..298 CDD:275368 8/19 (42%)
C2H2 Zn finger 306..328 CDD:275368 8/21 (38%)
prgNP_609232.2 zf-AD 16..94 CDD:462262 18/78 (23%)
COG5048 <212..340 CDD:227381 40/127 (31%)
C2H2 Zn finger 239..260 CDD:275368 4/20 (20%)
C2H2 Zn finger 268..288 CDD:275368 5/19 (26%)
C2H2 Zn finger 296..316 CDD:275368 8/19 (42%)
C2H2 Zn finger 324..344 CDD:275368 8/23 (35%)
C2H2 Zn finger 352..372 CDD:275368 4/22 (18%)
C2H2 Zn finger 416..436 CDD:275368
C2H2 Zn finger 443..464 CDD:275368
C2H2 Zn finger 470..490 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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