DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8159 and M03D4.4

DIOPT Version :9

Sequence 1:NP_649823.2 Gene:CG8159 / 41040 FlyBaseID:FBgn0037619 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001023313.1 Gene:M03D4.4 / 177375 WormBaseID:WBGene00019751 Length:505 Species:Caenorhabditis elegans


Alignment Length:271 Identity:72/271 - (26%)
Similarity:112/271 - (41%) Gaps:46/271 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 RSQRQRHEDTAPKTPASPLEVMIKLESLSNGDEEDDGIDHLDSCNEADMELAIKAMSSSTEDDGT 161
            |.:|:.|                  |::..||:|:|.::  |..:|..| :.||...|....|..
 Worm    22 RHEREEH------------------ETVEQGDQEEDRME--DDSDELAM-IKIKIEDSDFLSDTD 65

  Fly   162 TSPVRLKRTRRRGLKKGGKGENRTKVTLPVFFCDQCGNNITGKSSFDRHLRKHSGIRPFQCELCP 226
            :|.:.:..|...  :|...||...      :.|:.|......|.....|:|.|||.:|..|..|.
 Worm    66 SSQLSMNPTTPS--EKSSSGEKGR------YECEDCHEMFAVKRELATHMRIHSGEQPHSCTQCG 122

  Fly   227 ARFLSSGELKGHQVMHTGDRKFQCRYCDRTYVNYSGRLRHERTHTNDRPFICAQCGKSFTNSYIL 291
            ..|.:...||.|.:.|||:|...|.:|::.:.......:|...|:..||..|.||.|:|...:.|
 Worm   123 KEFGTRQLLKKHWMWHTGERSHVCPHCNKAFFQKGHLTQHLMIHSGGRPHECPQCHKTFIFKFDL 187

  Fly   292 KNHMLIHTGERLFRCELCHRSFARPT-----HLKTHFRSNTHKHNLEKSMADAGGVQLSPSQSAD 351
            ..||.||. ||.|.|:.|.|||.:..     |||...:.::...:|           |:|:..|.
 Worm   188 NRHMKIHQ-ERGFSCQQCGRSFLKQVMLDEHHLKCKGKPSSPIRSL-----------LTPTMKAG 240

  Fly   352 QVKFVTEKEPE 362
            ....::.|.|:
 Worm   241 LESAISIKPPQ 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8159NP_649823.2 zf-AD 5..78 CDD:214871
C2H2 Zn finger 194..214 CDD:275368 5/19 (26%)
COG5048 <197..322 CDD:227381 45/129 (35%)
zf-H2C2_2 206..231 CDD:290200 9/24 (38%)
C2H2 Zn finger 222..242 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 3/19 (16%)
zf-H2C2_2 265..287 CDD:290200 9/21 (43%)
C2H2 Zn finger 278..298 CDD:275368 8/19 (42%)
zf-H2C2_2 291..315 CDD:290200 13/23 (57%)
C2H2 Zn finger 306..328 CDD:275368 8/26 (31%)
M03D4.4NP_001023313.1 C2H2 Zn finger 90..110 CDD:275368 5/19 (26%)
zf-H2C2_2 102..127 CDD:290200 9/24 (38%)
C2H2 Zn finger 118..138 CDD:275368 6/19 (32%)
C2H2 Zn finger 146..166 CDD:275368 3/19 (16%)
zf-H2C2_2 158..181 CDD:290200 8/22 (36%)
zf-C2H2 172..194 CDD:278523 8/21 (38%)
C2H2 Zn finger 174..194 CDD:275368 8/19 (42%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

Return to query results.
Submit another query.