DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8159 and blmp-1

DIOPT Version :9

Sequence 1:NP_649823.2 Gene:CG8159 / 41040 FlyBaseID:FBgn0037619 Length:399 Species:Drosophila melanogaster
Sequence 2:NP_001251370.1 Gene:blmp-1 / 172917 WormBaseID:WBGene00003847 Length:817 Species:Caenorhabditis elegans


Alignment Length:244 Identity:68/244 - (27%)
Similarity:111/244 - (45%) Gaps:24/244 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 SQRQRHEDTAP-KTPASPLEVMIKLESLSNGDEEDDGIDHLDSCNEADM-ELAIKAMSSSTEDDG 160
            ||..:||.:.| .|.|||        :...|.....|.....|.:.:.. :|.....|||:.:|.
 Worm   433 SQDFQHELSKPLYTSASP--------AFGGGGGMGGGFGMGGSAHTSSFHQLPFVNHSSSSHNDS 489

  Fly   161 TTSPVRLKRTRRRGLKKGGKGENRTKVTLPVFFCDQCGNNITGKSSFDRHLRKHSGIRPFQCELC 225
            :.:.|      ...:::...|:.|       :.|..|.......|:...|:|.|:|.|||:||:|
 Worm   490 SFNGV------PNYVQQQENGKTR-------YACKDCNKTFGQLSNLKVHVRTHTGERPFKCEIC 541

  Fly   226 PARFLSSGELKGHQVMHTGDRKFQCRYCDRTYVNYSGRLRHERTHTNDRPFICAQCGKSFTNSYI 290
            ...|.....|:.|.::|||:|..:|..||:.:.:.|....|.|.|...:|:.|..|...||....
 Worm   542 TKEFTQLAHLQKHHLVHTGERPHRCDICDKRFSSTSNLKTHLRLHNGQKPYTCDVCDAKFTQYVH 606

  Fly   291 LKNHMLIHTGERLFRCELCHRSFARPTHLKTHFRSNTHK-HNLEKSMAD 338
            |:.|..:|..||.:.|..|.:.:..|:.|:||:::.|.| .:::.||.|
 Worm   607 LRLHKRLHANERPYSCGTCGKKYISPSGLRTHWKTTTCKEEDMKDSMRD 655

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8159NP_649823.2 zf-AD 5..78 CDD:214871
C2H2 Zn finger 194..214 CDD:275368 5/19 (26%)
COG5048 <197..322 CDD:227381 40/124 (32%)
zf-H2C2_2 206..231 CDD:290200 11/24 (46%)
C2H2 Zn finger 222..242 CDD:275368 6/19 (32%)
C2H2 Zn finger 250..270 CDD:275368 6/19 (32%)
zf-H2C2_2 265..287 CDD:290200 7/21 (33%)
C2H2 Zn finger 278..298 CDD:275368 6/19 (32%)
zf-H2C2_2 291..315 CDD:290200 7/23 (30%)
C2H2 Zn finger 306..328 CDD:275368 6/21 (29%)
blmp-1NP_001251370.1 SET 119..247 CDD:214614
zf-C2H2 508..530 CDD:278523 5/21 (24%)
C2H2 Zn finger 510..530 CDD:275368 5/19 (26%)
zf-H2C2_2 522..547 CDD:290200 11/24 (46%)
C2H2 Zn finger 538..558 CDD:275368 6/19 (32%)
zf-H2C2_2 550..575 CDD:290200 9/24 (38%)
C2H2 Zn finger 566..586 CDD:275368 6/19 (32%)
zf-H2C2_2 578..603 CDD:290200 7/24 (29%)
C2H2 Zn finger 594..614 CDD:275368 6/19 (32%)
zf-H2C2_2 606..631 CDD:290200 7/24 (29%)
ARS2 <620..772 CDD:282772 11/36 (31%)
C2H2 Zn finger 622..641 CDD:275368 6/18 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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