DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and ZAP1

DIOPT Version :10

Sequence 1:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_012479.1 Gene:ZAP1 / 853390 SGDID:S000003592 Length:880 Species:Saccharomyces cerevisiae


Alignment Length:189 Identity:57/189 - (30%)
Similarity:81/189 - (42%) Gaps:29/189 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   142 QPVEIS---NEPDATD-SDV-NLEEIDLPDE-------------------DGLESDHDLPNVQIH 182
            |..|:|   ..||.|. :|| |:..|..|::                   |.||:.|.......:
Yeast   674 QTHEVSKADGAPDMTSANDVSNIPPIKQPEQVICQWDGCNKSFSSAQELNDHLEAVHLTRGKSEY 738

  Fly   183 KC--DTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTHHTLEPPFACRYCD 245
            :|  ..|......:..|:||...|:..:||.||.|.:.|.....|..|..| |:.|.|:.|..|:
Yeast   739 QCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRT-HSGEKPYKCHICN 802

  Fly   246 RRYFSVVGRKKHERVHTNERPFVCDQCGKAFTRTCILKAHMAVHQVVRKYSCDVCDRSF 304
            :::......|.|.|.||.|:|..|..|||.|..:..|..|:..||  :||.|..|.:||
Yeast   803 KKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTHQ--KKYKCSDCSKSF 859

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_649821.2 zf-AD 5..76 CDD:214871
C2H2 Zn finger 184..204 CDD:275368 5/21 (24%)
C2H2 Zn finger 212..261 CDD:275368 15/48 (31%)
C2H2 Zn finger 269..289 CDD:275368 7/19 (37%)
C2H2 Zn finger 297..313 CDD:275368 4/8 (50%)
ZAP1NP_012479.1 COG5048 292..761 CDD:227381 20/86 (23%)
C2H2 Zn finger 743..762 CDD:275368 4/18 (22%)
SUF4-like 766..>814 CDD:411020 15/48 (31%)
C2H2 Zn finger 770..795 CDD:411020 9/25 (36%)
C2H2 Zn finger 770..790 CDD:275368 7/20 (35%)
C2H2 Zn finger 798..818 CDD:275368 5/19 (26%)
zf-H2C2_2 810..834 CDD:463886 11/23 (48%)
C2H2 Zn finger 826..846 CDD:275368 7/19 (37%)
Blue background indicates that the domain is not in the aligned region.

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