DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and Zfp110

DIOPT Version :9

Sequence 1:NP_001262384.1 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001347505.1 Gene:Zfp110 / 65020 MGIID:1890378 Length:832 Species:Mus musculus


Alignment Length:147 Identity:52/147 - (35%)
Similarity:70/147 - (47%) Gaps:9/147 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   179 VQIHK------CDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTHHTLEP 237
            ::|||      |..||.:..|......|:..|.|.|||.|..|.|.|:.:|.|..| |..|:.|.
Mouse   679 IKIHKGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKAFVQSSSLTQH-LRIHSGER 742

  Fly   238 PFACRYCDRRYFSVVGRKKHERVHTNERPFVCDQCGKAFTRTCILKAHMAVHQVVRKYSCDVCDR 302
            ||.|..|.|.:.......:|.|.||..:|:.|::|||||.::..|..|...|...|.|.|..|.:
Mouse   743 PFECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERPYVCIKCGK 807

  Fly   303 SFSLKKHLATHFISNTH 319
            :|:...||..|  ..||
Mouse   808 AFTQSSHLIGH--QKTH 822

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_001262384.1 zf-AD 5..76 CDD:214871
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..261 CDD:275368 17/48 (35%)
zf-H2C2_2 255..278 CDD:290200 11/22 (50%)
C2H2 Zn finger 269..289 CDD:275368 8/19 (42%)
zf-H2C2_2 282..305 CDD:290200 7/22 (32%)
C2H2 Zn finger 297..313 CDD:275368 5/15 (33%)
Zfp110NP_001347505.1 KRAB 18..77 CDD:214630
SCAN 159..246 CDD:307924
KRAB 283..324 CDD:307490
C2H2 Zn finger 663..682 CDD:275370 0/2 (0%)
C2H2 Zn finger 690..710 CDD:275368 5/19 (26%)
zf-H2C2_2 702..727 CDD:316026 10/24 (42%)
C2H2 Zn finger 718..738 CDD:275368 8/20 (40%)
zf-H2C2_2 730..754 CDD:316026 10/24 (42%)
C2H2 Zn finger 746..766 CDD:275368 5/19 (26%)
zf-C2H2 772..794 CDD:306579 8/21 (38%)
C2H2 Zn finger 774..794 CDD:275368 8/19 (42%)
zf-H2C2_2 786..811 CDD:316026 8/24 (33%)
C2H2 Zn finger 802..822 CDD:275368 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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