DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and CG17803

DIOPT Version :10

Sequence 1:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_650657.2 Gene:CG17803 / 42141 FlyBaseID:FBgn0038547 Length:587 Species:Drosophila melanogaster


Alignment Length:421 Identity:94/421 - (22%)
Similarity:143/421 - (33%) Gaps:145/421 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRVCGR--SRLCPKAVELFKPGRQDILRRIQLITGILLQQ-IPNAPDMVCFCCQTDLQSAMIFRR 67
            ||.|.|  || ...|.:|:......:|..|::|||:.:|| :...|..:|..||..:..:|.||.
  Fly    86 CRTCFRIISR-HEDAQDLYDRVNIALLHHIKVITGVWIQQGVKELPHHICSTCQETVNKSMEFRA 149

  Fly    68 QCILQQKKWVPLLQSDKVGASEEKKVEPNDPSTKKKTTKRRRGRPRMPLEIVDIVVTNESKASAG 132
            :|....||   |.|:     :|:..::..|...:.:               ::.|:..||...|.
  Fly   150 KCQQVDKK---LRQT-----TEKYNIQICDEEMESE---------------LENVLYEESAQQAK 191

  Fly   133 ESVGGDEFDQPVEISNEPDATDSDVNLEEIDLP----------DEDGLESDHDL----------- 176
            ..||.::|...:       ..||:..|:|.|.|          .||.|:.|.|.           
  Fly   192 GVVGLEDFSSEL-------LPDSEGVLDEDDFPLDAEPTQFSLSEDELDLDRDTEKDFALEQNKS 249

  Fly   177 --------------------------------------------------PNVQI---------- 181
                                                              |.:::          
  Fly   250 CNEIISIRKCKTKEEIGKVDHGAKVYKVVLGEYNSLKETAPKYSLSLPKKPQLRVSPEEKNRRRR 314

  Fly   182 ---------HKCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTHHTLEP 237
                     :.||.||.....:|.|..|...||..:.:.|.||||.|........|....|..|.
  Fly   315 ERIQAKPLNYVCDKCGHTFRQRSQLQMHLLRHNRAKNFECPECPKKFYDLYTRNIHVRALHKGEH 379

  Fly   238 PFACRYCDRRYFSVVGRKKHER-VH---------------TNERPFVCDQCGKAFTRTCILKAHM 286
            ||.|.:|:..:.:...|.:||| ||               .:.|.: |.||.|::|....|..||
  Fly   380 PFPCNHCNESFANASSRHRHERDVHGAGNRIRTRVKSKEEGSSRHY-CTQCTKSYTSKKGLVLHM 443

  Fly   287 AVHQVVRKYSCDVCDRSF----SLKKHLATH 313
            ..|...|.:.|.:|...|    ::|:|.|.|
  Fly   444 NFHNGSRPFQCKICQMKFADPSAMKRHQALH 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_649821.2 zf-AD 5..76 CDD:214871 24/72 (33%)
C2H2 Zn finger 184..204 CDD:275368 7/19 (37%)
C2H2 Zn finger 212..261 CDD:275368 17/49 (35%)
C2H2 Zn finger 269..289 CDD:275368 8/19 (42%)
C2H2 Zn finger 297..313 CDD:275368 6/19 (32%)
CG17803NP_650657.2 zf-AD 86..160 CDD:214871 26/77 (34%)
SUF4-like 320..>376 CDD:411020 16/55 (29%)
C2H2 Zn finger 323..351 CDD:411020 9/27 (33%)
C2H2 Zn finger 326..346 CDD:275368 7/19 (37%)
C2H2 Zn finger 354..375 CDD:411020 7/20 (35%)
C2H2 Zn finger 354..375 CDD:275368 7/20 (35%)
C2H2 Zn finger 383..401 CDD:275368 4/17 (24%)
C2H2 Zn finger 426..446 CDD:275368 8/19 (42%)
C2H2 Zn finger 454..474 CDD:275368 6/19 (32%)
C2H2 Zn finger 481..501 CDD:275368
C2H2 Zn finger 509..528 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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