DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and CG6689

DIOPT Version :9

Sequence 1:NP_001262384.1 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_650051.1 Gene:CG6689 / 41345 FlyBaseID:FBgn0037877 Length:613 Species:Drosophila melanogaster


Alignment Length:452 Identity:100/452 - (22%)
Similarity:149/452 - (32%) Gaps:151/452 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRVCGRSRLCP-KAVELFKPGRQDILRRIQLITGILLQQIPNAPDMVCFCCQTDLQSAMIFRRQC 69
            ||.|....... :|.:||.|....:|..|::|:|:.:...|:.|.::|..|::.|..|:.||..|
  Fly   167 CRTCYNDFTADFRAKDLFDPANSVLLFHIEVISGVWISHKPDEPRLMCPACKSALDQAIDFREMC 231

  Fly    70 ILQQKKWVPLLQS---------------------DKVGASEEKKVE--------------PNDPS 99
            |..:.|   |.|:                     |.:..:|...||              .:|..
  Fly   232 ISTELK---LSQAKPSTDEVQIEAENENPISSDHDLISDTENTNVEEIEDAGGDHVEDEATSDDQ 293

  Fly   100 TKKKTTKRRRGRP--RMPL----------EIVDIVVTNE-----------SKASAGESVGGDEFD 141
            |.::........|  :.||          |::|.....|           ||..|.|...|::  
  Fly   294 TSQEAVDEVAESPAAQDPLSVALGAKIFKELLDQYTGKEKARLRKGAPIASKPKAKEKAAGEQ-- 356

  Fly   142 QPVEISNEPDATDSDVNLEEIDLPDEDGLESDHDLPNVQIHKCDTCGIIKNNKSSLVRHQFEHNG 206
                   :|..:.:....||.:|.....|.:..  ||   ..||.||.......:|..|...|..
  Fly   357 -------KPKRSANPKTKEERNLIRRAQLRAKP--PN---FVCDQCGQAFRMSHNLRIHMLRHTR 409

  Fly   207 IRPYPCKECPKTFLVASELKAHNLTHHTLEPPFACRYCDRRYFSVVGRKKHE------------- 258
            .:.|.|.||||||..|.....|....|..|.||||.:|...:.....|:|||             
  Fly   410 TKNYQCTECPKTFYDAYMRNMHIRIRHRGETPFACGFCSETFAYPGARQKHESEVHNAAPRLIVK 474

  Fly   259 -----------------------------------RVHTN------------------------- 263
                                               :.||:                         
  Fly   475 RINPKPMPKPRESVRYQCKLCQKHYASKYALGWHIKSHTDANAYKCQRCSKSYSDPNKLKRHEMT 539

  Fly   264 --ERPFVCDQCGKAFTRTCILKAHMAVHQVVRKYSCDVCDRSFSLKKHLATHFISNTHKRNA 323
              :||..||.|.|.|.:...|:.|..:|...|.|.|:||:.:|..|.::.:|..|..|:.||
  Fly   540 HEKRPLQCDVCLKGFYQRTRLREHELIHTGERPYWCEVCNVNFRYKYNMKSHANSKMHQDNA 601

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_001262384.1 zf-AD 5..76 CDD:214871 21/70 (30%)
C2H2 Zn finger 184..204 CDD:275368 6/19 (32%)
C2H2 Zn finger 212..261 CDD:275368 20/96 (21%)
zf-H2C2_2 255..278 CDD:290200 12/97 (12%)
C2H2 Zn finger 269..289 CDD:275368 7/19 (37%)
zf-H2C2_2 282..305 CDD:290200 8/22 (36%)
C2H2 Zn finger 297..313 CDD:275368 5/15 (33%)
CG6689NP_650051.1 THAP 2..96 CDD:283206
zf-AD 167..240 CDD:214871 23/75 (31%)
zf-C2H2 385..407 CDD:278523 6/21 (29%)
C2H2 Zn finger 387..407 CDD:275368 6/19 (32%)
zf-H2C2_2 399..422 CDD:290200 9/22 (41%)
C2H2 Zn finger 415..436 CDD:275368 9/20 (45%)
C2H2 Zn finger 444..460 CDD:275368 3/15 (20%)
C2H2 Zn finger 492..512 CDD:275368 0/19 (0%)
C2H2 Zn finger 520..540 CDD:275368 0/19 (0%)
C2H2 Zn finger 547..567 CDD:275368 7/19 (37%)
zf-met 574..597 CDD:289631 7/22 (32%)
C2H2 Zn finger 575..591 CDD:275368 5/15 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 62 1.000 Inparanoid score I2531
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000724
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.960

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