DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and D19A

DIOPT Version :10

Sequence 1:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_477304.1 Gene:D19A / 38718 FlyBaseID:FBgn0022935 Length:845 Species:Drosophila melanogaster


Alignment Length:533 Identity:105/533 - (19%)
Similarity:160/533 - (30%) Gaps:227/533 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 NVCRVCGRSRLCPKAVELF-KPGRQDILRRIQLITGILLQQIPNAPDMVCFCCQTDLQSAMIFRR 67
            ::||:|........|.:|: .||   :.:::...|.:.::|....|..:|..|.|.|.....|::
  Fly    11 SLCRICLNHLQNDAAYDLYLVPG---LSKKLCFCTSLSVEQNDGFPKNLCTLCYTKLNELHDFQK 72

  Fly    68 QCILQQKKWVPLLQSDKVGASEEKKV-EPN----------------DP--STKKKTTKRRRGRPR 113
            ||:...:|:..|:.|:.........| :||                ||  :.|.:..:......:
  Fly    73 QCVDSVQKFQDLVASNVFACQSSFDVFDPNVAVQDYPAEEEDHVNYDPLLNHKMELIENEEDVFK 137

  Fly   114 MPLEIVDIVVTN-ESKASAGESVGGD------EFDQPVEISN--------EPDATDSDVNL---- 159
            | ||.||..... |.:|...|..||:      :.|..:|..|        ||:::|.|:.|    
  Fly   138 M-LEHVDKEAEEVEKEAKVEEDDGGNVSVKMFDDDSSIESGNDNDHDLDFEPNSSDDDIPLAQRM 201

  Fly   160 ------------------------------------EEIDLPD--------EDG----------- 169
                                                ||.:|.|        |||           
  Fly   202 RGPATGSGPQQDRFSNLDKPKPRPRGRPKKIKPPPPEEEELSDSSSESDDSEDGTSRGDKPKRKR 266

  Fly   170 --LESDH----------------------------DL---------------------------- 176
              :|..|                            ||                            
  Fly   267 IPIEERHLHRIIDCHICHQKFKKAIRYEEHMKYHNDLLPFQCKVETCKKGFTTANGLRIHIDHAH 331

  Fly   177 ------------------PNV--------QIH------------KCDTCGIIKNNKSSLVRHQFE 203
                              |.|        ::|            .|..|..:....::|.:|.::
  Fly   332 TELSEVHACIAEGCGKTFPRVRLLTFHMKKVHGITKAAAPLRDFPCTECDTVFRCPTALKKHMYK 396

  Fly   204 HNGIR-PYPCKECPKTFLVASELKAHNLTH---------------------------HTLEPPFA 240
            |.|.. ||||..|.|.|::.|.|:.|.:.|                           ||.|..|.
  Fly   397 HTGEELPYPCNICGKRFVINSALRDHLMRHAGIKNHVCPYCGVGKTTRQEWNAHILTHTKEKKFK 461

  Fly   241 CRYCDRRYFSVVGRKKHER-VHTNERPFVCDQCGKAFTRTCILKAHMAVHQVVRKYSCDVCDRSF 304
            ||.||....:......|.: ||...:.|.|..|||.|.::...|.|...|...:...|.:|.:.|
  Fly   462 CRQCDHASHNKQALSNHVKVVHEKRKDFACQYCGKTFGKSHACKVHERSHTGEKCCECKICGKIF 526

  Fly   305 ----SLKKHLATH 313
                ||.|||.||
  Fly   527 LCEKSLTKHLKTH 539

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_649821.2 zf-AD 5..76 CDD:214871 17/71 (24%)
C2H2 Zn finger 184..204 CDD:275368 4/19 (21%)
C2H2 Zn finger 212..261 CDD:275368 17/76 (22%)
C2H2 Zn finger 269..289 CDD:275368 7/19 (37%)
C2H2 Zn finger 297..313 CDD:275368 8/19 (42%)
D19ANP_477304.1 zf-AD 12..83 CDD:214871 18/73 (25%)
SFP1 <291..363 CDD:227516 4/71 (6%)
C2H2 Zn finger 343..362 CDD:275368 2/18 (11%)
C2H2 Zn finger 377..397 CDD:275368 4/19 (21%)
zf-H2C2_2 389..414 CDD:463886 10/24 (42%)
C2H2 Zn finger 406..426 CDD:275368 7/19 (37%)
C2H2 Zn finger 434..454 CDD:275368 0/19 (0%)
C2H2 Zn finger 462..483 CDD:275368 5/20 (25%)
C2H2 Zn finger 491..511 CDD:275368 7/19 (37%)
C2H2 Zn finger 519..539 CDD:275368 8/19 (42%)
C2H2 Zn finger 652..673 CDD:275368
C2H2 Zn finger 681..701 CDD:275368
zf-C2H2 707..729 CDD:395048
C2H2 Zn finger 709..729 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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