DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and CG11906

DIOPT Version :10

Sequence 1:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_611402.2 Gene:CG11906 / 37209 FlyBaseID:FBgn0034425 Length:634 Species:Drosophila melanogaster


Alignment Length:348 Identity:62/348 - (17%)
Similarity:120/348 - (34%) Gaps:93/348 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 CRVCGRSRLCPKAVELFKPGRQDIL-RRIQLITGILLQQIPNAPDMVCF-C-CQTDLQSAMIFRR 67
            |.|||.:    ||..|.......:: ||:.....|....|.:....:|. | |:.::.|.:   .
  Fly    46 CTVCGAA----KASALLDLRSNHVMQRRLSRDWKIHADVIRSTLKAICVECVCKLNMHSEV---T 103

  Fly    68 QCILQQKKWVPLLQSDKVGASEEKKVEPNDPSTKKKTTKRRRGRPRMPLEI-VDIVVTNESKASA 131
            :.::|:      :|..:....|..||      |...|:..:...|....|: ..::.:.|..|.:
  Fly   104 RSLMQR------MQRLQRSGGETTKV------TTTTTSPSQHSPPIADAEVSTTLIESQEEVAHS 156

  Fly   132 GESVGGDEFDQPVEI-----SNEPDATDSDVNLEEIDLPDEDGLESDHDLPNVQIHKCDTCGIIK 191
            |:||........:|:     ...|.|.::          :|...|.......::.|:|......:
  Fly   157 GQSVRSRSSCSVLEVYLAQQPYSPSAKET----------EEKHAEGWKWRTRLECHECGRAYFRR 211

  Fly   192 NNKSSLVRHQFEHNGIRPYP----CK---------ECPKTFLVASELKAHNLTHHTLEPPFACRY 243
            :..:..:|...:....:|.|    |:         |.|...:.:|.:             :.||:
  Fly   212 DYYAQHLRRCSKTRRKQPRPSRVKCRVLNEASYDEEAPSRAIRSSRI-------------YYCRH 263

  Fly   244 CDRRYFSVVGRKKHERVHTNERPFVCDQCGKAFTRTCILKAHMAVHQVVRKYSCDVCDRSFSLKK 308
            ||..:.:::.:::|||:.                           ||  ::|.||:|:.....|.
  Fly   264 CDAEFETLISKRQHERMK---------------------------HQ--QRYPCDLCEAQLDTKY 299

  Fly   309 HLATHFISNTHKRNAEAVTSSSE 331
            ....|......|:.|.|:....|
  Fly   300 EWEMHHTICQAKQEALAIVEQQE 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_649821.2 zf-AD 5..76 CDD:214871 16/72 (22%)
C2H2 Zn finger 184..204 CDD:275368 2/19 (11%)
C2H2 Zn finger 212..261 CDD:275368 11/57 (19%)
C2H2 Zn finger 269..289 CDD:275368 0/19 (0%)
C2H2 Zn finger 297..313 CDD:275368 4/15 (27%)
CG11906NP_611402.2 None

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