DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and CG2116

DIOPT Version :10

Sequence 1:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_572444.2 Gene:CG2116 / 31735 FlyBaseID:FBgn0030003 Length:598 Species:Drosophila melanogaster


Alignment Length:323 Identity:79/323 - (24%)
Similarity:117/323 - (36%) Gaps:80/323 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 KKVEPNDPSTKKKTTKRRRGRPRMPLEIVDIVVTNESKASAGESVGGDEFDQP-VEISNEPDATD 154
            |:|:|::     |..:..:| ||..:...|::.|         .|..||...| ||.|...|..|
  Fly   200 KEVKPSE-----KMLEEFKG-PRRYMLFDDLIAT---------IVDFDEDSTPLVEFSMISDIMD 249

  Fly   155 SDVNLEEIDLPDEDGLESD-------------HDLPNVQIHKCDTCGIIKNNKSSLVRHQFEHNG 206
            .       .||.|.|:..|             |.:|....:.|..|.....:...|..|...|.|
  Fly   250 E-------KLPVECGICPDVMHKSKLSKHHKTHLVPGTNRYACIYCTETYRDCKYLAGHARRHMG 307

  Fly   207 IRPYPCKECPKTFLVASELKAHNLTHHTLEPPFACRYCDRRYFSVVGRKKH-ERVHTNERPFVCD 270
            ||||.|:.|...|....:|:.||...| ||....|..|.:.:......|:| |..|..:|.|.|:
  Fly   308 IRPYVCELCTLYFSTKQDLRVHNQRRH-LEKEHICEVCGKTFAQNTQLKRHREATHEKKRRFQCE 371

  Fly   271 QCGKAFTRTCILKAHMA---------------------VHQVVR----------KYSCDVCDRSF 304
            .|.||:.:...|:.|:.                     .|::.|          .|.|.:|...|
  Fly   372 YCQKAYYKNFSLQEHIRNVHMGKRRMLKCPFCGMQCRDAHKMARHRKEMHLSQGTYVCHLCQEEF 436

  Fly   305 SLKKHLATH-----FISNTHK-RNAEAVTSSSEYMSM----LSFESDETWSQGTPLTTSIDED 357
            :...:...|     ..|||.: .||:.....|:..|:    ::.:.|:....| ||....|||
  Fly   437 TDISYFDAHKRSIQCRSNTRRFVNADGNREGSDSESISGRNMNGQDDDYDGMG-PLQEEYDED 498

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_649821.2 zf-AD 5..76 CDD:214871
C2H2 Zn finger 184..204 CDD:275368 4/19 (21%)
C2H2 Zn finger 212..261 CDD:275368 14/49 (29%)
C2H2 Zn finger 269..289 CDD:275368 6/40 (15%)
C2H2 Zn finger 297..313 CDD:275368 3/15 (20%)
CG2116NP_572444.2 C2H2 Zn finger 256..275 CDD:275368 2/18 (11%)
zf-C2H2_8 257..339 CDD:464935 23/82 (28%)
C2H2 Zn finger 285..305 CDD:275368 4/19 (21%)
PHA00733 <308..357 CDD:177301 16/49 (33%)
C2H2 Zn finger 313..334 CDD:275368 6/20 (30%)
C2H2 Zn finger 341..362 CDD:275368 5/20 (25%)
C2H2 Zn finger 370..388 CDD:275368 6/17 (35%)
C2H2 Zn finger 400..418 CDD:275370 2/17 (12%)
C2H2 Zn finger 429..447 CDD:275368 4/17 (24%)
Blue background indicates that the domain is not in the aligned region.

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