DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and CG3847

DIOPT Version :10

Sequence 1:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_572317.2 Gene:CG3847 / 31577 FlyBaseID:FBgn0029867 Length:380 Species:Drosophila melanogaster


Alignment Length:298 Identity:67/298 - (22%)
Similarity:107/298 - (35%) Gaps:81/298 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    88 SEEKKVEPN----------DPSTKKKTTKRRRGRPRMPLEIVDIV----VTNESKASAGESV-GG 137
            :||..::.|          :.||.::.|..:.......|.||..:    |..:.:...||.| ..
  Fly    79 AEEVIIDENGHAVTLQELVENSTVEEETIEQGDGTHTILHIVPNIHGEEVEEDEELEDGEEVEHD 143

  Fly   138 DEF----DQPVEISNEPDATDSDVNLEEIDLPDED--GLESDHDLPN----------VQIH---- 182
            |||    .:..|:..|.|...|.|....||..::|  |.......||          :::|    
  Fly   144 DEFVTVDHEGGELEVEDDEVGSIVFESTIDHAEQDPYGRNKTFYCPNCGNCYSAAGSLKLHMRAC 208

  Fly   183 ------------KCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTH--- 232
                        ||..|..:.|:.:.|..|...|.|.:|:.|..|.:.|:..|:..||..:|   
  Fly   209 LRQRNEISTDERKCKVCSKVFNSVAYLKEHMMRHTGEQPFRCTRCYRKFVEESKFTAHMESHKHQ 273

  Fly   233 -----------------HTLEPPFACRYCDRRYFSV--VGRKKHERVHTNERPFVCDQCGKAFTR 278
                             ..:...|.|.:|.:.:..|  ||:.|        |.:.||.|...::.
  Fly   274 DKLEAEAVALAAQHGGKKVVVKEFQCAFCSQNFTVVFDVGQVK--------RRYACDACRDKYSN 330

  Fly   279 TCILKAHMAVHQVVRKYSCDVCDRSF----SLKKHLAT 312
            ...|:.|....:..|::||..|.|.|    .|::||.|
  Fly   331 AEALRQHKQQVEEKREFSCVRCGRKFVFEGFLQRHLPT 368

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_649821.2 zf-AD 5..76 CDD:214871
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..261 CDD:275368 14/70 (20%)
C2H2 Zn finger 269..289 CDD:275368 5/19 (26%)
C2H2 Zn finger 297..313 CDD:275368 8/20 (40%)
CG3847NP_572317.2 C2H2 Zn finger 188..216 CDD:275368 3/27 (11%)
C2H2 Zn finger 222..242 CDD:275368 5/19 (26%)
C2H2 Zn finger 250..270 CDD:275368 6/19 (32%)
Blue background indicates that the domain is not in the aligned region.

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