DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and Zfp341

DIOPT Version :9

Sequence 1:NP_001262384.1 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_955008.2 Gene:Zfp341 / 228807 MGIID:2682937 Length:846 Species:Mus musculus


Alignment Length:149 Identity:43/149 - (28%)
Similarity:66/149 - (44%) Gaps:12/149 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly   181 IHKCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTHHTLEPPFACRYCD 245
            ::||..| :.|.:....:.|..: .....:||..|.|.|.....|:.|..||.: ...|.|:.|.
Mouse   536 VYKCVKC-VNKYSTPEALEHHVQ-TATHSFPCPHCQKVFPCERYLRRHLPTHGS-GGRFRCQICK 597

  Fly   246 RRYFSVVGRKKHERVHTNERPFVCDQCGKAFTRTCILKAHMAVHQVVRKYSCDV-----CDRSFS 305
            :.:......|.|..:|:.|:|:.|..|..||.|...||.||.:|:..:||.|..     |.:.|:
Mouse   598 KFFRKEHYLKLHAHIHSGEKPYKCSVCESAFNRKDKLKRHMLIHEPFKKYKCPFSMHTGCSKEFN 662

  Fly   306 ----LKKHLATHFISNTHK 320
                ||.|:.:|.....||
Mouse   663 RQDKLKAHILSHAGLKLHK 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_001262384.1 zf-AD 5..76 CDD:214871
C2H2 Zn finger 184..204 CDD:275368 4/19 (21%)
C2H2 Zn finger 212..261 CDD:275368 13/48 (27%)
zf-H2C2_2 255..278 CDD:290200 9/22 (41%)
C2H2 Zn finger 269..289 CDD:275368 9/19 (47%)
zf-H2C2_2 282..305 CDD:290200 9/27 (33%)
C2H2 Zn finger 297..313 CDD:275368 6/24 (25%)
Zfp341NP_955008.2 COG5048 321..726 CDD:227381 43/149 (29%)
zf-C2H2 321..342 CDD:278523
C2H2 Zn finger 322..342 CDD:275368
zf-H2C2_2 334..359 CDD:290200
C2H2 Zn finger 350..370 CDD:275368
C2H2 Zn finger 444..464 CDD:275368
C2H2 Zn finger 472..494 CDD:275368
C2H2 Zn finger 502..522 CDD:275368
C2H2 Zn finger 539..561 CDD:275370 4/23 (17%)
C2H2 Zn finger 565..585 CDD:275368 6/19 (32%)
C2H2 Zn finger 593..613 CDD:275368 4/19 (21%)
zf-H2C2_2 605..630 CDD:290200 9/24 (38%)
C2H2 Zn finger 621..641 CDD:275368 9/19 (47%)
C2H2 Zn finger 649..674 CDD:275368 6/24 (25%)
C2H2 Zn finger 682..702 CDD:275368 43/149 (29%)
C2H2 Zn finger 710..727 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167836414
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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