DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and LOC110437839

DIOPT Version :10

Sequence 1:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_021331309.2 Gene:LOC110437839 / 110437839 -ID:- Length:383 Species:Danio rerio


Alignment Length:299 Identity:77/299 - (25%)
Similarity:108/299 - (36%) Gaps:103/299 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 QTDLQSAMIFRRQCILQQKKWVPLLQSDKVGASEEKKVEPNDPSTKKKTTKRRRGRPRMPLEIVD 120
            ||||   |:.:.    :..:|..:         |||:   .|..|.:|.|....||||       
Zfish    27 QTDL---MVLKE----ETHQWSEM---------EEKQ---QDIPTNEKPTLTSHGRPR------- 65

  Fly   121 IVVTNESKASAGESVGGDEFDQPVEISNEPDATDSDVNLEEIDLPDEDGLESDHDLPNVQIH--- 182
               .:.|:.:......|..|.|.                                 ||:.:|   
Zfish    66 ---KSNSRCNFSCKQCGKSFSQK---------------------------------PNLDVHMRV 94

  Fly   183 -------KCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTH-------- 232
                   .|:.||.....|.|...|...|.|.|||.|::|.:||.......||...|        
Zfish    95 HTREKPYTCEQCGKSFGKKQSFKTHTRIHTGERPYTCQQCGQTFYHVGNFAAHMRIHTGEKPYSC 159

  Fly   233 -------------------HTLEPPFACRYCDRRYFSVVGRKKHERVHTNERPFVCDQCGKAFTR 278
                               ||.|.|:.|:.|.:.:::.....:|.|:||.|||:.|.||||:|..
Zfish   160 SQCGKSFKQNGTLTVHMRTHTGERPYTCQQCGKSFYTSENFTQHMRIHTGERPYTCQQCGKSFYN 224

  Fly   279 TCILKAHMAVHQVVRKYSCDVCDRSF----SLKKHLATH 313
            |..|.|||.:|...:.|||..|.:|:    :||.|..||
Zfish   225 TGNLAAHMRIHTGEKPYSCLQCGKSYKHNSNLKAHTRTH 263

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_649821.2 zf-AD 5..76 CDD:214871 5/19 (26%)
C2H2 Zn finger 184..204 CDD:275368 6/19 (32%)
C2H2 Zn finger 212..261 CDD:275368 15/75 (20%)
C2H2 Zn finger 269..289 CDD:275368 11/19 (58%)
C2H2 Zn finger 297..313 CDD:275368 6/19 (32%)
LOC110437839XP_021331309.2 COG5048 72..>368 CDD:227381 59/225 (26%)
C2H2 Zn finger 75..95 CDD:275368 6/52 (12%)
C2H2 Zn finger 103..123 CDD:275368 6/19 (32%)
C2H2 Zn finger 131..151 CDD:275368 6/19 (32%)
C2H2 Zn finger 159..179 CDD:275368 0/19 (0%)
C2H2 Zn finger 187..207 CDD:275368 4/19 (21%)
C2H2 Zn finger 215..235 CDD:275368 11/19 (58%)
C2H2 Zn finger 243..263 CDD:275368 6/19 (32%)
C2H2 Zn finger 271..291 CDD:275368
C2H2 Zn finger 299..319 CDD:275368
C2H2 Zn finger 327..347 CDD:275368
C2H2 Zn finger 355..375 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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