DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nom and Zfp677

DIOPT Version :10

Sequence 1:NP_649821.2 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:XP_038956107.1 Gene:Zfp677 / 102552527 RGDID:7689541 Length:628 Species:Rattus norvegicus


Alignment Length:166 Identity:63/166 - (37%)
Similarity:92/166 - (55%) Gaps:1/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   182 HKCDTCGIIKNNKSSLVRHQFEHNGIRPYPCKECPKTFLVASELKAHNLTHHTLEPPFACRYCDR 246
            :||..||:.....|||..||..|.|.:||.||||.|:|.:.|.|..|. .:||.|.|:.|..|||
  Rat   235 YKCRECGMSFPYLSSLKVHQNLHPGAKPYKCKECDKSFTIKSTLIKHQ-RNHTGEKPYTCNVCDR 298

  Fly   247 RYFSVVGRKKHERVHTNERPFVCDQCGKAFTRTCILKAHMAVHQVVRKYSCDVCDRSFSLKKHLA 311
            .:......|.|:|:||.|:|:.|.:|||:||::..||.|..:|...:.|.|:.|||||:.|..|.
  Rat   299 SFRQCANLKTHQRLHTGEKPYKCKECGKSFTQSSSLKKHQNLHTGKKPYKCEECDRSFTEKSTLT 363

  Fly   312 THFISNTHKRNAEAVTSSSEYMSMLSFESDETWSQG 347
            ||...:|.|:..:..:....:.|..:.::.:|...|
  Rat   364 THKRIHTGKKPYKCNSCGKSFNSCTNLKTHQTLHTG 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_649821.2 zf-AD 5..76 CDD:214871
C2H2 Zn finger 184..204 CDD:275368 8/19 (42%)
C2H2 Zn finger 212..261 CDD:275368 20/48 (42%)
C2H2 Zn finger 269..289 CDD:275368 9/19 (47%)
C2H2 Zn finger 297..313 CDD:275368 8/15 (53%)
Zfp677XP_038956107.1 KRAB 5..45 CDD:460171
COG5048 165..594 CDD:227381 63/166 (38%)
C2H2 Zn finger 181..201 CDD:275368
C2H2 Zn finger 209..229 CDD:275368
C2H2 Zn finger 237..257 CDD:275368 8/19 (42%)
C2H2 Zn finger 265..285 CDD:275368 9/20 (45%)
C2H2 Zn finger 293..313 CDD:275368 7/19 (37%)
C2H2 Zn finger 321..341 CDD:275368 9/19 (47%)
C2H2 Zn finger 349..369 CDD:275368 10/19 (53%)
C2H2 Zn finger 377..397 CDD:275368 2/19 (11%)
C2H2 Zn finger 405..425 CDD:275368
C2H2 Zn finger 433..453 CDD:275368
C2H2 Zn finger 461..481 CDD:275368
C2H2 Zn finger 489..509 CDD:275368
C2H2 Zn finger 517..537 CDD:275368
C2H2 Zn finger 545..565 CDD:275368
C2H2 Zn finger 573..593 CDD:275368
C2H2 Zn finger 606..626 CDD:275368
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.