DRSC/TRiP Functional Genomics Resources

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Protein Alignment nom and znf341

DIOPT Version :9

Sequence 1:NP_001262384.1 Gene:nom / 41038 FlyBaseID:FBgn0037617 Length:370 Species:Drosophila melanogaster
Sequence 2:NP_001108045.1 Gene:znf341 / 100136854 ZFINID:ZDB-GENE-080204-99 Length:796 Species:Danio rerio


Alignment Length:363 Identity:69/363 - (19%)
Similarity:114/363 - (31%) Gaps:130/363 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly   112 PRMPLEIVDIVVTNESKASAGESVGGDEFD---QPVEISNEPDATDSDVNLEEIDLPD------- 166
            ||||:.:..:.:..|...:..|....:|.|   |..::..|...::|:...:::.|.|       
Zfish   356 PRMPITVRLLPLNAEQNTAQDEQTVSEEHDGDVQEAQVQPEDKQSNSNSLNKQMILIDSSYQCQF 420

  Fly   167 -EDGLES-------------------------------DHDLPNVQIH------KCDTCGIIKNN 193
             .|...|                               |..|.::..|      :|..|..:..:
Zfish   421 CSDKFSSYFQLKSHMTQHKGEQVYRCVLKSCSQTFQKLDQFLEHIHTHQEQLTYRCHQCSKVFPS 485

  Fly   194 KSSLVRHQFEH-----------------------------------NGIRPYPCKECPKTFLVAS 223
            ...|..||:.|                                   |....|||..|.|.|....
Zfish   486 LFELGLHQYTHSFCPQQSQRKETSYYRCMKCQSKYSTQEALEQHLLNATHNYPCPHCQKVFPCER 550

  Fly   224 ELKAHNLTHHTLEPPFACRYCDRRYFSVVGRKKHERVHTNERPFVCDQCGKAFTRTCILKAHMAV 288
            ..:.| |:.|.:...|.|:.|.:.:.:....|.|.::|:.|:||.|..|...|.|...:|.||.:
Zfish   551 YFRRH-LSTHGVGGKFKCQICKKFFKTEHYLKLHTQIHSGEKPFKCSVCEATFNRKDKVKRHMLI 614

  Fly   289 HQVVRKY---------------------------------SCDVCDRSFSLKKHLATH------- 313
            |:..:||                                 .|.||.:|||.:.|:..|       
Zfish   615 HEPFKKYKCPFRTHVGCTKEFNRPDKLKAHILSHSGIKPFKCQVCQKSFSRRAHMLEHQRSHTDN 679

  Fly   314 --FISNTHKRNAEAVTSSSEYMSMLSFESDETWSQGTP 349
              |..:|.:|.........|:...|:.:.::    |||
Zfish   680 YRFRCSTCRRGFSRHRYYREHRCPLATQEED----GTP 713

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nomNP_001262384.1 zf-AD 5..76 CDD:214871
C2H2 Zn finger 184..204 CDD:275368 5/19 (26%)
C2H2 Zn finger 212..261 CDD:275368 12/48 (25%)
zf-H2C2_2 255..278 CDD:290200 9/22 (41%)
C2H2 Zn finger 269..289 CDD:275368 7/19 (37%)
zf-H2C2_2 282..305 CDD:290200 10/55 (18%)
C2H2 Zn finger 297..313 CDD:275368 7/15 (47%)
znf341NP_001108045.1 COG5048 295..676 CDD:227381 61/320 (19%)
C2H2 Zn finger 296..316 CDD:275368
zf-H2C2_2 308..333 CDD:290200
C2H2 Zn finger 324..344 CDD:275368
C2H2 Zn finger 418..438 CDD:275368 2/19 (11%)
C2H2 Zn finger 446..468 CDD:275368 2/21 (10%)
C2H2 Zn finger 476..496 CDD:275368 5/19 (26%)
C2H2 Zn finger 513..535 CDD:275370 1/21 (5%)
C2H2 Zn finger 539..559 CDD:275368 6/20 (30%)
C2H2 Zn finger 567..587 CDD:275368 4/19 (21%)
zf-H2C2_2 579..604 CDD:290200 9/24 (38%)
C2H2 Zn finger 595..615 CDD:275368 7/19 (37%)
C2H2 Zn finger 623..648 CDD:275368 0/24 (0%)
zf-H2C2_2 641..665 CDD:290200 5/23 (22%)
C2H2 Zn finger 656..676 CDD:275368 8/19 (42%)
C2H2 Zn finger 684..701 CDD:275368 3/16 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579935
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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