DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment TMEM216 and Tmem216

DIOPT Version :10

Sequence 1:NP_649818.1 Gene:TMEM216 / 41035 FlyBaseID:FBgn0037614 Length:136 Species:Drosophila melanogaster
Sequence 2:NP_001257968.1 Gene:Tmem216 / 361727 RGDID:1304607 Length:141 Species:Rattus norvegicus


Alignment Length:121 Identity:40/121 - (33%)
Similarity:65/121 - (53%) Gaps:0/121 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EILMYLNSFYFGMYAAFEVGVGVLKAINLNYGENALSREASILLSLCIIETVRIVFGRKSSLSDR 72
            |||.:||.:|:..|...|:.:.:.|.:.|.|....|..:..:||....||.:|:.||.|.:|..|
  Rat    14 EILFFLNGWYYATYFLLELLIFLYKGLLLPYPTANLVLDVVMLLLYLGIEVIRLFFGTKGNLCQR 78

  Fly    73 GWQATASVILTLPSLAIVIYLCCFQTFVLKLEIILSALMITLQGAELVYASIFICT 128
            ......||.||.||..:..|....||:||:||.|::::::...|:||:...:.:.|
  Rat    79 KMPLGISVALTFPSAMMASYYLLLQTYVLRLEAIMNSILLFFCGSELLLEMLTLAT 134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TMEM216NP_649818.1 Transmemb_17 9..115 CDD:462907 35/105 (33%)
Tmem216NP_001257968.1 Transmemb_17 15..121 CDD:462907 35/105 (33%)

Return to query results.
Submit another query.