DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8112 and Cmbl

DIOPT Version :9

Sequence 1:NP_731269.2 Gene:CG8112 / 41033 FlyBaseID:FBgn0037612 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_001008770.1 Gene:Cmbl / 310201 RGDID:1306952 Length:245 Species:Rattus norvegicus


Alignment Length:71 Identity:16/71 - (22%)
Similarity:31/71 - (43%) Gaps:21/71 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 FNLP----FVSA---CILLLESTRLL---MKMHAFVRYNAERVLNGKA------KKEDAEEEKEG 297
            :||.    |:.|   .::.||...:|   :|.|..|.|.. :..:|:.      |:||...    
  Rat   165 YNLKNPTLFIFAENDAVIPLEQVSILIQKLKEHCIVNYQV-KTFSGQTHGFVHRKREDCSP---- 224

  Fly   298 SERPFV 303
            :::|::
  Rat   225 ADKPYI 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8112NP_731269.2 MBOAT <231..473 CDD:294479 16/71 (23%)
CmblNP_001008770.1 DLH 21..244 CDD:223489 16/71 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1275897at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

Return to query results.
Submit another query.