DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and si:ch211-214e3.5

DIOPT Version :9

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_001339026.1 Gene:si:ch211-214e3.5 / 798582 ZFINID:ZDB-GENE-050208-19 Length:1413 Species:Danio rerio


Alignment Length:797 Identity:138/797 - (17%)
Similarity:230/797 - (28%) Gaps:305/797 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 PSQNDQNSLQHYDANLQQQLLQQQQYQQHFQAAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFYGG 145
            |..:||:  ||.|::|...|..:..:|....|:..:|..                          
Zfish    12 PENHDQS--QHEDSSLDHTLPVELAHQLPETASCNEHCD-------------------------- 48

  Fly   146 NLRPSPQPTPTSASTIAPVAVATGSSEKLQALTPPMDVTPPKSPAKSSQSNIEPEKEHDQMSNSS 210
              :....|..::...:.....|:|                 |:|.|..|..|          .|.
Zfish    49 --QDETAPEDSATDNLQTDGKASG-----------------KTPCKMQQGAI----------FSG 84

  Fly   211 EDMKYMAESEDDDTNIRMPIYNSHGKMKNYKCKTCGVVAITKVDFWAHTRTHMKPDKILQCPKCP 275
            :.:.:......|||.     |:.:..:|:::    ||              |........|..|.
Zfish    85 KILSFCCSECKDDTT-----YSPNDLLKHFQ----GV--------------HKGTPPTYPCDLCL 126

  Fly   276 FVTEFKHHLEYHIRKHKNQKPFQCDKCS----YTCVNKSMLNSHRKS-HSSVYQYRCADCDYATK 335
            |||.....|:.|...|:|.. ..|:.|:    |:.:   :|..|..| ||...|:.|..|:::|:
Zfish   127 FVTNEFSSLQRHRIGHRNTL-VTCEICNDGVQYSLL---LLTRHFTSCHSRNGQFSCKKCEFSTR 187

  Fly   336 YCHSFKLHLR------------------------------------------------------- 345
            ...:|..|:.                                                       
Zfish   188 DAGTFVQHIHHHNELNHNARREYLSKHLTLAHGEEMNKWRPNEDNSSGLKLLLKKSPPGGGSRES 252

  Fly   346 ----KYGHKPGM-VLDEDG-TPNPSLVID--------VYGTRRGPKSKNGGPIAS---------- 386
                ||...||: :.|.:| ..||...::        ..|.::........|:.|          
Zfish   253 QWMSKYNAIPGVGLFDHNGRLINPEKTLEDTQQFLERAVGVKKESNKWTKSPLKSEPQILQLIPS 317

  Fly   387 --------------GGSGSGSRKSNVAAVAPQQQQSQPAQPVATSQLSAALQGFPLVQGNSAPPA 437
                          |..|.|   :.:..:..:.:.|.|  |..|:|    :.||.:|.|...   
Zfish   318 ATQQPKLQEHEISPGSPGHG---NGLTVLMVKNKISIP--PNCTTQ----VMGFKMVDGKKH--- 370

  Fly   438 ASPVLPLPASPAKSVASVE---------QTPSLPSPANLLPPLASLLQQNRNMAFFPYWNLNLQM 493
                |.|...|.|...|.|         :..:.|:.:.....:||||....              
Zfish   371 ----LVLKVIPTKQEDSTESEVFESHISEDENKPTSSPCSSSIASLLSLES-------------- 417

  Fly   494 LAAQQQAAVLAQLSPRMR-----------------EQLQQQNQQQSDNEEEEQDDEYERKSVDSA 541
             ....:|:::|:.|..:.                 |..::..|...|.|...........|.|.:
Zfish   418 -GESNEASLIAEESHEVENHIGHHYPLTEEHKVYFETTRKSGQVNEDAEIAHSVKVLSTASKDRS 481

  Fly   542 MDL-----SQG---TPVKEDEQQQQPQQPLAMNLKVEEEATP----LMSSSNASRRKGRVLK--- 591
            :.|     |.|   .|..|.......::.|..:.:....||.    |.:..|||:.|...|.   
Zfish   482 LSLCPSHRSNGRSSPPPHEMSFLYPSEKRLTDDTQTSNSATTLSDLLTAPVNASKCKTTALASLM 546

  Fly   592 ------LDTLLQLRSEAMTS----PEQLKVPSTPMPTASSPIAGRKPMPEEHCSG---------- 636
                  .|.:...||::..|    |....:..:.:|||.:..:....:.|.|.|.          
Zfish   547 DEESTLTDAVSHSRSDSEISVDDKPTNADILKSKLPTADATFSKTTLIQEPHFSSKGGESFENNN 611

  Fly   637 ---TSSADESMETAHVPQANTS---------------ASSTASSSGNSSNASSN----------- 672
               |||..|..:..:..:|.||               .||...|:|.|::.:||           
Zfish   612 EPTTSSVAEERQGPNSVKAKTSLCEVTDKKTCDAELGESSQFCSNGFSNSQASNIVLENSTEVIN 676

  Fly   673 --SNGNSSSNSSSNGTT 687
              :....|.|.:|.|.|
Zfish   677 NKATETDSKNKTSKGKT 693

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 2/19 (11%)
C2H2 Zn finger 271..291 CDD:275368 7/19 (37%)
zf-H2C2_2 283..308 CDD:290200 7/28 (25%)
C2H2 Zn finger 299..319 CDD:275368 6/24 (25%)
C2H2 Zn finger 327..345 CDD:275368 5/17 (29%)
C2H2 Zn finger 707..727 CDD:275371
C2H2 Zn finger 735..757 CDD:275371
si:ch211-214e3.5XP_001339026.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170592551
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.930

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