DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and ZNF18

DIOPT Version :10

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_653281.2 Gene:ZNF18 / 7566 HGNCID:12969 Length:549 Species:Homo sapiens


Alignment Length:314 Identity:73/314 - (23%)
Similarity:113/314 - (35%) Gaps:89/314 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    79 PSPS------QNDQNSL---QHYDANLQQQLLQ---QQQYQQHFQAAQQQHHHHHHLMGGFNPLT 131
            |.|:      :||:.:|   .|.|    |:||.   |...:...||:          :.||....
Human   282 PRPTCIGDRQENDKENLNLENHRD----QELLHASCQASGEVPSQAS----------LRGFFTED 332

  Fly   132 PPG-------LPNPMQHFY--GGNLRPSPQPTPTSASTIAPVAVATGSSEKLQALTPPMDVTPPK 187
            .||       ||..:|:..  |...:.|||..               .|||......|       
Human   333 EPGCFGEGENLPEALQNIQDEGTGEQLSPQER---------------ISEKQLGQHLP------- 375

  Fly   188 SPAKSSQSNIEPEKEHDQMSNSSEDMKYMAESEDDDTNIRMPIYNSHGK--MKN----------- 239
            :|.....|.:..| |..:.|...:....||:        ::|.....||  .:|           
Human   376 NPHSGEMSTMWLE-EKRETSQKGQPRAPMAQ--------KLPTCRECGKTFYRNSQLIFHQRTHT 431

  Fly   240 ----YKCKTCGVVAITKVDFWAHTRTHM--KPDKILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQ 298
                ::|..|....:...||..|.|||.  ||.|...|.|  ..::|. .|.:|.:.|..:||::
Human   432 GETYFQCTICKKAFLRSSDFVKHQRTHTGEKPCKCDYCGK--GFSDFS-GLRHHEKIHTGEKPYK 493

  Fly   299 CDKCSYTCVNKSMLNSHRKSHSSVYQYRCADCDYATKYCHSFKLHLRKY-GHKP 351
            |..|..:.:.:|..|.|::.|:....|:|:.|..:..:..|...|.|.: |.||
Human   494 CPICEKSFIQRSNFNRHQRVHTGEKPYKCSHCGKSFSWSSSLDKHQRSHLGKKP 547

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 6/19 (32%)
C2H2 Zn finger 271..291 CDD:275368 5/19 (26%)
zf-H2C2_2 283..308 CDD:463886 7/24 (29%)
C2H2 Zn finger 299..319 CDD:275368 5/19 (26%)
C2H2 Zn finger 327..345 CDD:275368 4/17 (24%)
C2H2 Zn finger 707..727 CDD:275371
C2H2 Zn finger 735..757 CDD:275371
ZNF18NP_653281.2 SCAN 37..148 CDD:128708
KRAB 222..270 CDD:214630
zf-C2H2 409..430 CDD:395048 3/20 (15%)
C2H2 Zn finger 410..430 CDD:275368 3/19 (16%)
COG5048 <436..549 CDD:227381 34/115 (30%)
C2H2 Zn finger 438..458 CDD:275368 6/19 (32%)
C2H2 Zn finger 466..486 CDD:275368 5/22 (23%)
zf-H2C2_2 482..503 CDD:463886 6/20 (30%)
C2H2 Zn finger 494..514 CDD:275368 5/19 (26%)
zf-H2C2_2 506..530 CDD:463886 6/23 (26%)
C2H2 Zn finger 522..542 CDD:275368 5/19 (26%)
Blue background indicates that the domain is not in the aligned region.

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