DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hb and rest

DIOPT Version :10

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_031759548.1 Gene:rest / 734016 XenbaseID:XB-GENE-955466 Length:1453 Species:Xenopus tropicalis


Alignment Length:696 Identity:134/696 - (19%)
Similarity:234/696 - (33%) Gaps:201/696 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   187 KSPAKSSQSNIEPE---------------------------KEHDQMSNSSEDMK-----YMAES 219
            |:..|.|.|||..|                           |.|::...:....|     |...|
 Frog   241 KTQGKESDSNIPEESDISKGPIQCDRCGYNTNRFDHYLAHLKHHNKAGENERVYKCTICTYTTVS 305

  Fly   220 EDDDTNIRMPIYNSHGKMKN------YKCKTCGVVAITKVDFWAHTRTHMKPDKILQCPKCPFVT 278
            |          |:....::|      |.|..|...:..|.::..|.||| ..::..||..||:.:
 Frog   306 E----------YHWKKHLRNHYPRILYTCSQCSYFSDRKNNYIQHIRTH-TGERPYQCIICPYSS 359

  Fly   279 EFKHHLEYHIRKHKNQKPFQCDKCSY----------------------TC-------VNKSMLNS 314
            ..|.||..|:|.|..:|||:|::|||                      ||       .::|....
 Frog   360 SQKTHLTRHMRTHSGEKPFKCEQCSYVASNQHEVTRHARQVHNGPKPLTCPHCDYKTADRSNFKK 424

  Fly   315 HRKSHSSVYQYRCADCDY-ATKYC---------HS---------FKLHLRKYGHKPGMVLDED-- 358
            |.:.|.:..|:.|..||| |:|.|         ||         .|:.||....:.| |.|.|  
 Frog   425 HVELHVNPRQFLCPVCDYAASKKCNLQYHIKSRHSGCTNITMDVSKVKLRTKKGEVG-VADTDTN 488

  Fly   359 -GTPNPSLV-------IDVYGTRRGPKSKN---GGPIASGGSGSGSRKSNVAAVAPQQQQSQ-PA 411
             .|.|.:::       :......|..|||.   .|.:|        :||.:::...:.:.|: .|
 Frog   489 KQTENGNIIKKKLEETVKAEKKERCVKSKKRMIDGQVA--------KKSRLSSTQKKIKASEVRA 545

  Fly   412 QPVATSQLSAALQGFPLVQGNSAPPAASPV--LPLPASPAKSVASVEQTPSLPSPANLLPPLASL 474
            :.:...:.|:.::....:..|.:....|.|  ..|..|||..|.:.|....:|.      .:..|
 Frog   546 EKIEKFRKSSCVKRKADLLENPSDTLTSTVKKKKLKNSPASKVITSEIKDDIPK------KVKGL 604

  Fly   475 LQQNRNMAFFPYWNLNLQMLAAQQQAAVLAQLSPRMREQLQQQNQQQSDNEEEEQDDEYERKSVD 539
            :::..|.|                           ::.:.:::...||.|.:.....:...:.||
 Frog   605 VKKKENSA---------------------------VKSKHKKKTGAQSSNGKRNMPKKITEQKVD 642

  Fly   540 SAMDLSQGTPVKEDEQQQQPQQPLAMNLKVEE-EATPLMSSSN--ASRRKGRV-------LKLDT 594
            ....|....||..|.::|.....:|.....|: .||.:.|.:|  ::...|.:       |.::|
 Frog   643 KGNKLDSKIPVAPDIEEQMIVGKVANENDSEQFVATDIASINNNLSTESCGLLNEVVHTDLSINT 707

  Fly   595 LLQLRSEAMTSPEQLKVPSTPMPTASSPIAGRKPMPEEHCSGTSSADESMETAHVPQANTSASST 659
            .|:.:..|.:..:...|....:..|         |..:..:|.|..:::.:...:.....|....
 Frog   708 TLETKLSAGSESKSEHVSKAIIELA---------MQVDVKAGISKQEKTQDNYLMDIETISTDLE 763

  Fly   660 ASSSGNSSNASSNSNGNSSSN---SSSNGTTSAVAAPPSG-------TPAAAGAIYECK------ 708
            ..:.....|......||:.::   .|:..|.....:.|:.       .|.....:.|||      
 Frog   764 KPNQVLLQNGIPPKKGNTIADLLVDSAKTTVYLQISKPTSCLLKDCCQPNKKLQVGECKPTCYVP 828

  Fly   709 --YCDI-------FFKDAVLYTIHMGYHSCDDVFKC--NMCGEKCD 743
              .|:.       ....:..:.:..|..|||....|  ::||:..|
 Frog   829 MELCETSADLPLEHGDPSATHLVSRGTPSCDHPVNCGESLCGQHVD 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 8/19 (42%)
zf-H2C2_2 283..308 CDD:463886 14/53 (26%)
C2H2 Zn finger 299..319 CDD:275368 8/48 (17%)
C2H2 Zn finger 327..345 CDD:275368 10/36 (28%)
C2H2 Zn finger 707..727 CDD:275371 4/34 (12%)
C2H2 Zn finger 735..757 CDD:275371 4/11 (36%)
restXP_031759548.1 zf-H2C2_5 322..346 CDD:404746 8/24 (33%)
C2H2 Zn finger 324..344 CDD:275368 5/19 (26%)
zf-H2C2_2 336..361 CDD:463886 8/25 (32%)
C2H2 Zn finger 352..372 CDD:275368 8/19 (42%)
zf-H2C2_2 364..389 CDD:463886 12/24 (50%)
C2H2 Zn finger 380..398 CDD:275368 4/17 (24%)
C2H2 Zn finger 409..429 CDD:275368 3/19 (16%)
zf-H2C2_5 409..429 CDD:404746 3/19 (16%)
C2H2 Zn finger 437..458 CDD:275368 7/20 (35%)
PTZ00121 <498..>639 CDD:173412 27/181 (15%)
PHA03307 850..>1185 CDD:223039 8/25 (32%)
Drf_FH1 913..>1025 CDD:461881
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.