DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and ZSCAN18

DIOPT Version :10

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001139014.1 Gene:ZSCAN18 / 65982 HGNCID:21037 Length:566 Species:Homo sapiens


Alignment Length:657 Identity:120/657 - (18%)
Similarity:200/657 - (30%) Gaps:245/657 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   121 HHLMGGFNPLTPPGLPNPMQHFYG---GNLRPSPQPTPTSASTIAPVAVAT-GSSEKLQALTPPM 181
            |.::.|.:||.|| .|....|.:.   |.:.|..:...:..|:.||..:.| ||:..:|...|  
Human    29 HLVIPGTSPLEPP-CPWLDSHIFQCRFGKMLPLEKAFASPRSSPAPPDLPTPGSAAGVQQEEP-- 90

  Fly   182 DVTPPKSPAKSSQSNI--------EPEKEHDQMSNSSEDMK--YMAESEDDDTNIRMPIYNSHGK 236
            :..|.::||....|.:        |....|..::...|..:  .|.|:...:..:.:.:..    
Human    91 ETIPERTPADLEFSRLRFREFVYQEAAGPHQTLARLHELCRQWLMPEARSKEQMLELLVLE---- 151

  Fly   237 MKNYKCKTCGVVAITKVDFWAHTRTHMKPDKILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDK 301
                  :..|::                |||:.     |:|..              |.|..|.|
Human   152 ------QFLGIL----------------PDKVR-----PWVVA--------------QYPESCKK 175

  Fly   302 CSYTCVNKSMLNSHRKSHSSVYQYRCADCDYATKYCHSFKLHLRKYGHKPGMVLDEDGTP--NPS 364
            .:      |::..                             |.....:|||:|   |:|  :.|
Human   176 AA------SLVEG-----------------------------LADVLEEPGMLL---GSPAGSSS 202

  Fly   365 LVIDVYGTRRGPKSKNGGPIASGGSGSGSRKSNVAAVAPQQQQSQPAQPVATSQLSAALQGFPLV 429
            ::.|      |...::..|:...|                 :.:.|:|.:...::.|        
Human   203 ILSD------GVYERHMDPLLLPG-----------------ELASPSQALGAGEIPA-------- 236

  Fly   430 QGNSAPPAASPVL---PL----------------PASPAKSVASVEQTPSLPSPANLLPPLASLL 475
                  |:.:|.|   ||                ||:..:.:.|..:.|........|.|....|
Human   237 ------PSETPWLSPDPLFLEQRRVREAKTEEDGPANTEQKLKSFPEDPQHLGEWGHLDPAEENL 295

  Fly   476 QQNRNMAFFPYWNLNLQMLAAQQQAAVLAQLSPRMREQLQQQNQQQSDNEE---EEQDDEYERKS 537
            :..|.:..:.|                  |||       |.....:.|.||   .|:|       
Human   296 KSYRKLLLWGY------------------QLS-------QPDAASRLDTEELRLVERD------- 328

  Fly   538 VDSAMDLSQGTPVKEDEQQQQPQQPLAMNLKVEEEATPLMSSSNASRRKGRVLKLDTLLQLRSEA 602
                   .||:.:.|..::|:......      |||.|                ...|.:|.:||
Human   329 -------PQGSSLPEGGRRQESAGCAC------EEAAP----------------AGVLPELPTEA 364

  Fly   603 MTSPEQLKVPS-TPMPTASSPIAGRKPMPE-----EHCSGTSSADESMETAHVPQANTSASSTAS 661
            .........|| |.......|  |:.|.|:     |..|.|.|..:|:.....|...|      :
Human   365 PPGDALADPPSGTTEEEEEQP--GKAPDPQDPQDAESDSATGSQRQSVIQQPAPDRGT------A 421

  Fly   662 SSGNSSNASSNSNGNSSSNSSSNGTTSAVAA---PPSGTPA-AAGAIYECKYCDIFFKDAVLYTI 722
            ..|.......:.:|.|....||:|.::.:.|   |.:..|. :.|..|.|..|.    :|..:..
Human   422 KLGTKRPHPEDGDGQSLEGVSSSGDSAGLEAGQGPGADEPGLSRGKPYACGECG----EAFAWLS 482

  Fly   723 H-MGYHS 728
            | |.:||
Human   483 HLMEHHS 489

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 1/19 (5%)
C2H2 Zn finger 271..291 CDD:275368 2/19 (11%)
zf-H2C2_2 283..308 CDD:463886 4/24 (17%)
C2H2 Zn finger 299..319 CDD:275368 3/19 (16%)
C2H2 Zn finger 327..345 CDD:275368 0/17 (0%)
C2H2 Zn finger 707..727 CDD:275371 5/20 (25%)
C2H2 Zn finger 735..757 CDD:275371
ZSCAN18NP_001139014.1 SCAN 101..189 CDD:460417 18/167 (11%)
KRAB <284..321 CDD:214630 10/61 (16%)
katE 372..>456 CDD:236886 21/91 (23%)
C2H2 Zn finger 471..491 CDD:275368 7/23 (30%)
C2H2 Zn finger 499..519 CDD:275368
Blue background indicates that the domain is not in the aligned region.

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