DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hb and Zfp110

DIOPT Version :9

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001347505.1 Gene:Zfp110 / 65020 MGIID:1890378 Length:832 Species:Mus musculus


Alignment Length:380 Identity:75/380 - (19%)
Similarity:125/380 - (32%) Gaps:101/380 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    38 NSVASSPRQSPIPSTNHLEQFLKQQQQQLQQQP---------------------------MDTLC 75
            :||....|....|.| |......|||...|.:|                           ||:..
Mouse   455 DSVEWQGRSGSTPVT-HGSSIKNQQQGSEQGKPGTSRDPITLTVPAKVYQKATGSKESILMDSSD 518

  Fly    76 AMTPS--PSQNDQNSLQHYDANLQQQLLQQQQYQQHFQAAQQQHHHHHHLMGGF-----NPLTPP 133
            ||...  |..:.:....|........:||....|            :|.:..|.     |.|...
Mouse   519 AMVSDVPPKIHQKGPEWHKVGESNNSMLQGSSVQ------------NHQMESGAGRASDNSLLTH 571

  Fly   134 GLP--NPMQHFYGGNLRPSPQPTPTSASTIAPVAVATGSSEKLQALTPPMDVTPPKSPAKSSQSN 196
            .||  :..:.:..||:    |....|...|.|....: ..|:::.|:             :|:.:
Mouse   572 ALPVKSHQKGYKEGNV----QGNRNSWKHIKPHQKGS-KGERVEELS-------------TSEKH 618

  Fly   197 IEPEKEHDQMSNSSEDMKYMAESEDDD-----------------TNIRMPIYNSHGKMKNY---- 240
            :...|.|.:.|...:|.:..|..:.|.                 .|.| ..::.|.:..::    
Mouse   619 VPYVKNHLKTSERGKDREINASIKCDPYIKTYYRGSDVGRLRRANNCR-KAFSLHAQQISFIKIH 682

  Fly   241 ------KCKTCGVVAITKVDFWAHTRTHM--KPDKILQCPKCPFVTEFKHHLEYHIRKHKNQKPF 297
                  :|..||.:......|..|.:.|.  :|...:.|.|. ||.  ...|..|:|.|..::||
Mouse   683 KGSQVCRCSECGKLFRNARYFSVHKKIHTGERPYMCMACGKA-FVQ--SSSLTQHLRIHSGERPF 744

  Fly   298 QCDKCSYTCVNKSMLNSHRKSHSSVYQYRCADCDYATKYCHSFKLHLRKY-GHKP 351
            :|.:|..|..::|.::.|.::|:....|.|..|..|.:.......|.|.: |.:|
Mouse   745 ECSECGRTFNDRSAISQHLRTHTGAKPYHCERCGKAFRQSSHLTRHERTHTGERP 799

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 7/19 (37%)
zf-H2C2_2 283..308 CDD:290200 9/24 (38%)
C2H2 Zn finger 299..319 CDD:275368 5/19 (26%)
C2H2 Zn finger 327..345 CDD:275368 4/17 (24%)
C2H2 Zn finger 707..727 CDD:275371
C2H2 Zn finger 735..757 CDD:275371
Zfp110NP_001347505.1 KRAB 18..77 CDD:214630
SCAN 159..246 CDD:307924
KRAB 283..324 CDD:307490
C2H2 Zn finger 663..682 CDD:275370 3/19 (16%)
C2H2 Zn finger 690..710 CDD:275368 5/19 (26%)
zf-H2C2_2 702..727 CDD:316026 7/25 (28%)
C2H2 Zn finger 718..738 CDD:275368 7/22 (32%)
zf-H2C2_2 730..754 CDD:316026 9/23 (39%)
C2H2 Zn finger 746..766 CDD:275368 5/19 (26%)
zf-C2H2 772..794 CDD:306579 6/21 (29%)
C2H2 Zn finger 774..794 CDD:275368 5/19 (26%)
zf-H2C2_2 786..811 CDD:316026 4/14 (29%)
C2H2 Zn finger 802..822 CDD:275368
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167847303
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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