DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hb and rest

DIOPT Version :10

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001340795.1 Gene:rest / 564772 ZFINID:ZDB-GENE-080415-1 Length:854 Species:Danio rerio


Alignment Length:858 Identity:172/858 - (20%)
Similarity:278/858 - (32%) Gaps:265/858 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QQQPMDTLCAMTPSPSQNDQNSLQHYDANLQQQLLQQQQYQQHFQ-------------------- 111
            |...:.|:...:.|.|:.|.:::..|..:..:.|..||  ..|.|                    
Zfish    50 QMMELQTVACSSYSDSEEDDDAVVRYSMDTSEDLYTQQ--ASHIQPEPVLEEIEIVRVGRPPNQT 112

  Fly   112 ------AAQQQHHHHHHLMGGFNPLTPPGLPNPMQHFYGGNLRPSPQPTPTSASTIAPVAVATGS 170
                  |:.:|......::........|....|.| :.|.|.:.......|..:....|.....|
Zfish   113 ESTENAASAEQKRTTLAILESSKKKKKPFFCKPCQ-YQGENEQEFIVHIRTHGAKKMLVVNGGDS 176

  Fly   171 SEKLQALTPPMDVTPPKSPAKSSQSNIEPEKEHDQMS-NSSEDMKYMAE-----SEDDDTNIRMP 229
            .|.|.|...|....|   .|:|::||.:.....::.. |::....|||.     .|.:|..:   
Zfish   177 DEDLSADAGPQTSVP---NAESAESNSKGVIRCERCGYNTNRFDHYMAHLKHHTKEGEDQRV--- 235

  Fly   230 IYNSHGKMKNYKCKTCGVVAITKVDFWAHTRTHMKPDKILQCPKCPFVTEFKHHLEYHIRKHKNQ 294
                      :||..|....|::..:..|.|.|. |.|:..|.:|.:.::.|::...|||.|..:
Zfish   236 ----------FKCTICAYTTISQYHWKKHLRNHF-PSKLFTCSQCSYFSDRKNNYIQHIRTHTGE 289

  Fly   295 KPFQCDKCSYTCVNKSMLNSHRKSHSSVYQYRCADCDY----------------------ATKYC 337
            :||||..|.|:...|:.|..|.::||....::|.:|.|                      :..||
Zfish   290 RPFQCIYCEYSSSQKTHLTRHMRTHSGERPFKCDNCSYLAANQHEVTRHARQVHNGPKPLSCPYC 354

  Fly   338 H-------SFKLHLR-------------KY-------------GHKPG---MVLD---------- 356
            .       :||.|:.             ||             ...||   :.:|          
Zfish   355 QYKTADRSNFKKHVELHVNPRQFLCPVCKYAASKKCNLQYHIKSRHPGCKDISMDVSKVRLRVKR 419

  Fly   357 ---EDGTPNPSLVIDVYGTRRGPKSKNGGPIASGGSGSGSRKSNVAAVAPQQQQS---------Q 409
               :|.:||.   :.....:...:.::.|||    :.|..:.|.:.||...::.|         |
Zfish   420 SDGDDASPNK---LTAEQAKIMEELEDAGPI----NLSIKKPSKLNAVVETEKSSKKNMDGKANQ 477

  Fly   410 PAQPVATSQLSAALQGFPLVQGNSAPPAASPVLPLPASPAKSVASVEQTPSLPSPANLLPPLASL 474
            | ||.....||            ...|.......|....|  |...|:|.:..:..|        
Zfish   478 P-QPNEKKSLS------------KNEPKEKTAKKLKGKTA--VKDTEETQTEDTRVN-------- 519

  Fly   475 LQQNRNMAFFPYWNLNLQMLAAQQQAAVLAQLSPRMREQLQQQN--QQQSD-----------NEE 526
                           |.:.....:::|..|..|.:.:|:..:.:  |||||           ||.
Zfish   520 ---------------NKKETKKAEKSAEKALKSRQKKEKPVKDSSVQQQSDDCEQTQHTPQQNET 569

  Fly   527 EEQDDEYERKS---VDSAMDLSQGTPVKEDEQQQQPQQPLAMNLKVEEEATPLMSSSNASRRKG- 587
            :|...|.|.:|   :|:|.|..:....|..::|.:..:.......||||.   :....|.:||. 
Zfish   570 QENRPEKENRSLTEIDNAKDCGKVQTKKPCKKQTKTLKVCGETQNVEEEE---IMRQKAGKRKAD 631

  Fly   588 ----------RVLKLDTLLQLRSEA-MTSPEQLKVPSTPMPTASS-----------PIAGRKP-- 628
                      |..|.|:.....||| .|:||.::..|:....||.           |:|..:|  
Zfish   632 NPAEPKQRIKRTKKKDSGKPTTSEANQTNPEVMESESSEANNASKPDDSIDESQNPPVAESRPDV 696

  Fly   629 -------MPEEHCSGTSSADESME----TA-----HVPQANTSASSTASSSG------------- 664
                   .|.|...........:|    ||     .|...|...|.|.|...             
Zfish   697 EPQSVPDCPIEKAPAVEEVQRPLEVEISTAAPDAPEVDSGNEMPSPTDSDGAPGFTPTLPLQHKP 761

  Fly   665 ----NSSNASSNSNGNSSSNSSSNGT-TSAVAA--------PPSGTPAAAGAI--YECKYCDIFF 714
                :.....||..|:..|:|:|.|: .|.:.|        |.....|:|..:  :.|.:||..|
Zfish   762 ADAEDDEGIHSNDGGSDISDSASEGSYDSGLMAGAEKLPETPTEERDASAARLLSHTCIFCDRSF 826

  Fly   715 KDAVLYTIHMGYH 727
            ...:.|..|:..|
Zfish   827 ALEMDYRKHLNRH 839

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 5/19 (26%)
C2H2 Zn finger 271..291 CDD:275368 6/19 (32%)
zf-H2C2_2 283..308 CDD:463886 10/24 (42%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)
C2H2 Zn finger 327..345 CDD:275368 8/46 (17%)
C2H2 Zn finger 707..727 CDD:275371 6/19 (32%)
C2H2 Zn finger 735..757 CDD:275371
restNP_001340795.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 172..199 8/29 (28%)
C2H2 Zn finger 238..258 CDD:275368 5/19 (26%)
zf-H2C2_5 264..288 CDD:404746 7/23 (30%)
C2H2 Zn finger 266..286 CDD:275368 6/19 (32%)
zf-H2C2_2 278..303 CDD:463886 10/24 (42%)
zf-H2C2_5 292..316 CDD:404746 9/23 (39%)
C2H2 Zn finger 294..314 CDD:275368 6/19 (32%)
zf-H2C2_2 306..327 CDD:463886 6/20 (30%)
C2H2 Zn finger 326..343 CDD:275370 1/16 (6%)
C2H2 Zn finger 351..371 CDD:275368 5/19 (26%)
C2H2 Zn finger 379..397 CDD:275368 2/17 (12%)
PTZ00121 <432..>691 CDD:173412 62/303 (20%)
FimV <622..>768 CDD:442403 28/145 (19%)
Blue background indicates that the domain is not in the aligned region.

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