DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hb and SCAND1

DIOPT Version :9

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001372639.1 Gene:SCAND1 / 51282 HGNCID:10566 Length:179 Species:Homo sapiens


Alignment Length:95 Identity:28/95 - (29%)
Similarity:39/95 - (41%) Gaps:18/95 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   381 GGPIA-------SGGSGSGSRKSNVAAVAPQQQQSQPAQPVATSQLSAALQGFPLVQGNSAPPAA 438
            |.|.|       ..||.|...::.|.:..|   ::.|..|..:|..:|..:..|..:.     ||
Human    12 GSPAAVPPEKLEGAGSSSAPERNCVGSSLP---EASPPAPEPSSPNAAVPEAIPTPRA-----AA 68

  Fly   439 SPVLPLPASPAK-SVA--SVEQTPSLPSPA 465
            |..|.||..||. |||  :..:..|.|.||
Human    69 SAALELPLGPAPVSVAPQAEAEARSTPGPA 98

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368
C2H2 Zn finger 271..291 CDD:275368
zf-H2C2_2 283..308 CDD:290200
C2H2 Zn finger 299..319 CDD:275368
C2H2 Zn finger 327..345 CDD:275368
C2H2 Zn finger 707..727 CDD:275371
C2H2 Zn finger 735..757 CDD:275371
SCAND1NP_001372639.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..104 28/95 (29%)
SCAN 104..>162 CDD:396558
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165156885
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.930

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