DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and Zfp518b

DIOPT Version :9

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:XP_008768453.1 Gene:Zfp518b / 498390 RGDID:1564150 Length:1077 Species:Rattus norvegicus


Alignment Length:670 Identity:137/670 - (20%)
Similarity:226/670 - (33%) Gaps:167/670 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GGFNPLT-PPGLPNPMQHFYGGNLRPSPQPTPT-----SASTIAPVAVATGSSEKLQALTPPMDV 183
            ||.:.|| .|..||..       .||..|...|     |.:..|.:.:||....|.....|..|:
  Rat    20 GGPSSLTMSPKQPNRA-------TRPERQEAQTLLYQGSEAEAATMTIATCVQCKSIHKIPTQDL 77

  Fly   184 TPPKSPAKSSQSNI--------EPEKEHDQMSNSSEDMKYMAESEDDDTNIRMPIYNSHGKMKNY 240
            .  |.|.:...:.:        .|.:.|...:|:.     .|...::...|..|:  :..|::|:
  Rat    78 R--KGPGQGQDTYVCFKCSLRAVPTQLHFVNNNAG-----AAHIRNETETISSPV--NKFKVRNF 133

  Fly   241 KCKTCGVVAITKVDFWAHTRTHMKPDKILQCPKCPFVTEFKHHLEY--HIRKHKNQKPFQCDKCS 303
                                   ||.| ..|.||.|.|  |..|:|  |..:|:..| |.|..||
  Rat   134 -----------------------KPGK-YYCDKCRFST--KDPLQYRKHTLQHEEIK-FICSHCS 171

  Fly   304 YTCVNKSMLNSHRKSHSSVYQYRCADCDYA---TKYC--HSFKLHLRKYGHKP------------ 351
            |....|.....|...|:.::.|||..|||.   ..|.  |..::|.|....:|            
  Rat   172 YISYTKGEFQRHLVKHTGIFPYRCEYCDYGAIRNDYIVKHRRRVHERAGAKRPFKTVAKLEPKRT 236

  Fly   352 -----GMVLDEDGTPNPSLVIDVYGTRRGPKSKNGGPIASGGSGSGSRKSNVAAVAPQQQQSQ-- 409
                 .|.|.:  .|:|         |...::|....::.....:...|::...:.|:.::.|  
  Rat   237 NISKQSMELSK--APSP---------RAAFQNKLSDQLSRFSLHASKDKTHNMMLLPELKKYQKD 290

  Fly   410 ----PAQPVATSQLSAALQGFPLVQGNSAPPAASPVLP-LPASPAKSVASVEQTPSLPSPANLLP 469
                |.:.........:|.|...|:.....|:..||.| ||.             ::.:|:.|:.
  Rat   291 VVCIPNKVTLCEPREVSLLGNKNVEVEVLSPSKEPVQPGLPL-------------TVMAPSELVV 342

  Fly   470 PLASLLQQNRNMAFFPYWNLNLQMLAAQQQAAV-LAQLSPRMREQLQQQNQQQSDNEEEEQDDEY 533
            |...|.|.           ::::::...||..: |..|....|.:..:.:...|:....|:....
  Rat   343 PTNCLAQL-----------MDVKVVNGTQQLVLKLFPLEENSRLETSRGDGGVSECTTTEKGSGG 396

  Fly   534 ERKSVDS------AMDLSQGTPVKEDEQQQQPQQPLAMNLKVEEEATPLMSSSNASRRKGRVLKL 592
            :.|.:.:      ||:.:.|..|..|......|:.| .|:|..:.....|.:|.....:...|..
  Rat   397 QTKVLSTEASRSLAMEGNAGEFVGLDRLHSLVQKQL-KNVKWVKSCNFFMPNSGIHSHQDSFLGP 460

  Fly   593 DTLLQL-RSEAMTSPEQLKVPS----TPMPTASSPIAGRKPMPEEHCS-------------GTSS 639
            ||:..| :|.::..|..|...|    :|....||...|    |....|             |..|
  Rat   461 DTIKDLQKSHSLCPPRALPSASVKSHSPASVQSSVSYG----PGATVSRFLTKAAAAFAEDGRGS 521

  Fly   640 ADESMETAHVPQANTSASSTASSSGNSSNASSNSNGNSSSNSSSNGTT----------SAVAAPP 694
            ..:|.:.  :|.|  |.||..|.||.........|...:.|.:|...|          ..:.:..
  Rat   522 RSDSQQL--LPLA--SLSSKVSFSGEKGLLPLGENDLEARNRTSRPETVVSSDRKLEDKPMESKA 582

  Fly   695 SGTPAAAGAIYECKYCDIFF 714
            .|:.:...::.:.:|..|.|
  Rat   583 VGSTSQVSSVQKKEYLHINF 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 0/19 (0%)
C2H2 Zn finger 271..291 CDD:275368 9/21 (43%)
zf-H2C2_2 283..308 CDD:290200 10/26 (38%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)
C2H2 Zn finger 327..345 CDD:275368 7/22 (32%)
C2H2 Zn finger 707..727 CDD:275371 3/8 (38%)
C2H2 Zn finger 735..757 CDD:275371
Zfp518bXP_008768453.1 C2H2 Zn finger 140..160 CDD:275368 9/21 (43%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
zf-H2C2_2 179..200 CDD:290200 6/20 (30%)
C2H2 Zn finger 195..216 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166350843
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.930

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