DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and Zfp518b

DIOPT Version :10

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001419754.1 Gene:Zfp518b / 498390 RGDID:1564150 Length:1077 Species:Rattus norvegicus


Alignment Length:670 Identity:137/670 - (20%)
Similarity:226/670 - (33%) Gaps:167/670 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   125 GGFNPLT-PPGLPNPMQHFYGGNLRPSPQPTPT-----SASTIAPVAVATGSSEKLQALTPPMDV 183
            ||.:.|| .|..||..       .||..|...|     |.:..|.:.:||....|.....|..|:
  Rat    20 GGPSSLTMSPKQPNRA-------TRPERQEAQTLLYQGSEAEAATMTIATCVQCKSIHKIPTQDL 77

  Fly   184 TPPKSPAKSSQSNI--------EPEKEHDQMSNSSEDMKYMAESEDDDTNIRMPIYNSHGKMKNY 240
            .  |.|.:...:.:        .|.:.|...:|:.     .|...::...|..|:  :..|::|:
  Rat    78 R--KGPGQGQDTYVCFKCSLRAVPTQLHFVNNNAG-----AAHIRNETETISSPV--NKFKVRNF 133

  Fly   241 KCKTCGVVAITKVDFWAHTRTHMKPDKILQCPKCPFVTEFKHHLEY--HIRKHKNQKPFQCDKCS 303
                                   ||.| ..|.||.|.|  |..|:|  |..:|:..| |.|..||
  Rat   134 -----------------------KPGK-YYCDKCRFST--KDPLQYRKHTLQHEEIK-FICSHCS 171

  Fly   304 YTCVNKSMLNSHRKSHSSVYQYRCADCDYA---TKYC--HSFKLHLRKYGHKP------------ 351
            |....|.....|...|:.::.|||..|||.   ..|.  |..::|.|....:|            
  Rat   172 YISYTKGEFQRHLVKHTGIFPYRCEYCDYGAIRNDYIVKHRRRVHERAGAKRPFKTVAKLEPKRT 236

  Fly   352 -----GMVLDEDGTPNPSLVIDVYGTRRGPKSKNGGPIASGGSGSGSRKSNVAAVAPQQQQSQ-- 409
                 .|.|.:  .|:|         |...::|....::.....:...|::...:.|:.::.|  
  Rat   237 NISKQSMELSK--APSP---------RAAFQNKLSDQLSRFSLHASKDKTHNMMLLPELKKYQKD 290

  Fly   410 ----PAQPVATSQLSAALQGFPLVQGNSAPPAASPVLP-LPASPAKSVASVEQTPSLPSPANLLP 469
                |.:.........:|.|...|:.....|:..||.| ||.             ::.:|:.|:.
  Rat   291 VVCIPNKVTLCEPREVSLLGNKNVEVEVLSPSKEPVQPGLPL-------------TVMAPSELVV 342

  Fly   470 PLASLLQQNRNMAFFPYWNLNLQMLAAQQQAAV-LAQLSPRMREQLQQQNQQQSDNEEEEQDDEY 533
            |...|.|.           ::::::...||..: |..|....|.:..:.:...|:....|:....
  Rat   343 PTNCLAQL-----------MDVKVVNGTQQLVLKLFPLEENSRLETSRGDGGVSECTTTEKGSGG 396

  Fly   534 ERKSVDS------AMDLSQGTPVKEDEQQQQPQQPLAMNLKVEEEATPLMSSSNASRRKGRVLKL 592
            :.|.:.:      ||:.:.|..|..|......|:.| .|:|..:.....|.:|.....:...|..
  Rat   397 QTKVLSTEASRSLAMEGNAGEFVGLDRLHSLVQKQL-KNVKWVKSCNFFMPNSGIHSHQDSFLGP 460

  Fly   593 DTLLQL-RSEAMTSPEQLKVPS----TPMPTASSPIAGRKPMPEEHCS-------------GTSS 639
            ||:..| :|.::..|..|...|    :|....||...|    |....|             |..|
  Rat   461 DTIKDLQKSHSLCPPRALPSASVKSHSPASVQSSVSYG----PGATVSRFLTKAAAAFAEDGRGS 521

  Fly   640 ADESMETAHVPQANTSASSTASSSGNSSNASSNSNGNSSSNSSSNGTT----------SAVAAPP 694
            ..:|.:.  :|.|  |.||..|.||.........|...:.|.:|...|          ..:.:..
  Rat   522 RSDSQQL--LPLA--SLSSKVSFSGEKGLLPLGENDLEARNRTSRPETVVSSDRKLEDKPMESKA 582

  Fly   695 SGTPAAAGAIYECKYCDIFF 714
            .|:.:...::.:.:|..|.|
  Rat   583 VGSTSQVSSVQKKEYLHINF 602

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 0/19 (0%)
C2H2 Zn finger 271..291 CDD:275368 9/21 (43%)
zf-H2C2_2 283..308 CDD:463886 10/26 (38%)
C2H2 Zn finger 299..319 CDD:275368 6/19 (32%)
C2H2 Zn finger 327..345 CDD:275368 7/22 (32%)
C2H2 Zn finger 707..727 CDD:275371 3/8 (38%)
C2H2 Zn finger 735..757 CDD:275371
Zfp518bNP_001419754.1 C2H2 Zn finger 140..160 CDD:275368 9/21 (43%)
zf-H2C2_5 167..189 CDD:404746 7/21 (33%)
C2H2 Zn finger 167..187 CDD:275368 6/19 (32%)
C2H2 Zn finger 195..216 CDD:275368 6/20 (30%)
Blue background indicates that the domain is not in the aligned region.

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