DRSC/TRiP Functional Genomics Resources

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Protein Alignment hb and CG4374

DIOPT Version :9

Sequence 1:NP_731267.1 Gene:hb / 41032 FlyBaseID:FBgn0001180 Length:758 Species:Drosophila melanogaster
Sequence 2:NP_001262874.1 Gene:CG4374 / 42767 FlyBaseID:FBgn0039078 Length:772 Species:Drosophila melanogaster


Alignment Length:730 Identity:151/730 - (20%)
Similarity:238/730 - (32%) Gaps:280/730 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly    67 QQQPMDTLCAMTPSPSQNDQNSLQHYDANLQQQLLQQQQYQQHFQAAQQQHHHHHHLMGGFNPLT 131
            ||||:.|..:...|.|.|     |....:.|..|.||||:|||.|..|||....           
  Fly   179 QQQPVTTSASNGGSASTN-----QPSPTSPQGHLQQQQQHQQHQQLQQQQQQQQ----------- 227

  Fly   132 PPGLPNPMQHFYGGNLRPSPQPTPTSASTIAPVAVATGSSEKLQALTPPMDVTPPKSPAKSSQSN 196
                                |..|.:.|:.|..:.|..||:.:.:|    |.|..:....:..:.
  Fly   228 --------------------QQQPNANSSSAASSGAGSSSDTISSL----DTTDGQIYTLTVLNG 268

  Fly   197 IEPEKEHDQMSNSSEDMKYMAESEDDDTNIRMPIYNSHGKMKNYKCKTCGVVAITKVDFWAHTRT 261
            .||               ::..||.:    ::|                     |.:|.      
  Fly   269 GEP---------------WLKRSESE----QLP---------------------TSLDL------ 287

  Fly   262 HMKPDKILQCPKCPFVTEFKHHLEYHIRKHKNQKPFQCDKCSYTCVNKSMLNSHRKSHSSVYQYR 326
                |.:|        ..|..::       |::.|:  |...::...|.::.:.....||:.|  
  Fly   288 ----DSLL--------GSFPGYI-------KSEYPY--DDSGFSTDGKDVIGNGTDGLSSISQ-- 329

  Fly   327 CADCDYATKYCHSFKLHLRKYGHKPGMVLDEDGTPNPSLVIDVYGTRRGPKSKNGGPIASGGSGS 391
                             .:..|.:....|       ||||..:              ..:||:..
  Fly   330 -----------------PQNQGQQAQQTL-------PSLVTAI--------------SLAGGNDL 356

  Fly   392 GSR------KSNVAAVAPQQQQSQPAQPVATSQLSAALQGFPLVQG-NSAPPAASPVLP------ 443
            |.:      .:|...:|....:::  |..|.|.|.:||||....:| :.......||:.      
  Fly   357 GQQLAQFQNNNNDWHMADHNTETE--QSTAESLLRSALQGKGYAKGLHMQNGLTMPVVKDEDMRR 419

  Fly   444 -LPASPAKSVASVEQTPSLPSPANLLPPLASLLQQNRNMAFFPYWNLNLQMLAAQQQAAVLAQLS 507
             |.|..|.::...:.|.|          .|.:..:.:.:           .|::|||        
  Fly   420 LLFADEAAALGFADSTLS----------AAQMFDEAQGI-----------HLSSQQQ-------- 455

  Fly   508 PRMREQLQQQNQQQSDNE-------------EEEQDDEYER-KSVDSAMDL-----SQGTPVKED 553
                 |.|||.|||:.|.             |....|::|: |.:.:.:..     |.|||...|
  Fly   456 -----QQQQQQQQQAHNGNANILVDDMFLSLENAFSDDFEKIKRIANEVQQFCSAGSSGTPTPGD 515

  Fly   554 -------------------EQQQQPQQPLAMNLKVEEEATPLMSSSNAS---RRKGRVLKLDTLL 596
                               ..|.||.|||...:......|..:.:|.||   |..|.|:|.....
  Fly   516 YVPSSDVLMQISPSPAVTSAGQLQPPQPLKPEVSTSTSPTSAVVASAASNHVRSGGGVVKPKKAY 580

  Fly   597 QLRSEAMTSPEQLKVPSTPMPTASSP-IAGRKPMPEEHCSGTSSADESMETAHVPQANTSASSTA 660
            :..|....:|   .|.:....:..:| |||         ||:.|              :|:|.:|
  Fly   581 KRSSSNNNNP---NVANNNQSSGGNPLIAG---------SGSGS--------------SSSSGSA 619

  Fly   661 SSSGNSSNASSNSNGNSSSNSSSNGTTSAVAAPPSGTPAAAGAIYECKYCDIFFKDAVLYTIHMG 725
            |||.||..|  ||.|:|||:|.|             |.....:::.|..|...|||.....:|:.
  Fly   620 SSSSNSPPA--NSGGSSSSSSGS-------------TQRKERSLHYCSICAKGFKDKYSVNVHIR 669

  Fly   726 YHSCDDVFKCNMCGE 740
            .|:.:..|.|::||:
  Fly   670 THTGEKPFACSLCGK 684

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hbNP_731267.1 C2H2 Zn finger 242..262 CDD:275368 2/19 (11%)
C2H2 Zn finger 271..291 CDD:275368 1/19 (5%)
zf-H2C2_2 283..308 CDD:290200 3/24 (13%)
C2H2 Zn finger 299..319 CDD:275368 2/19 (11%)
C2H2 Zn finger 327..345 CDD:275368 0/17 (0%)
C2H2 Zn finger 707..727 CDD:275371 6/19 (32%)
C2H2 Zn finger 735..757 CDD:275371 3/6 (50%)
CG4374NP_001262874.1 zf-C2H2 649..671 CDD:278523 6/21 (29%)
C2H2 Zn finger 651..671 CDD:275370 6/19 (32%)
zf-H2C2_2 663..688 CDD:290200 6/22 (27%)
C2H2 Zn finger 679..699 CDD:275370 3/6 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR24393
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
11.100

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